Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04218 ATGGAGAAGGAAATGGAGGCTGCTTTAGTTCATGTGGAGACGACCCACAAACACATGAATCCACATGTACAGTTACAAAGGCGCAAGGGTGGCTTCATTACCATGCCTTTCATTATAGCAAATGAGGCACTAGCTAAGCTGGCTAGCGTTGGGCTTATGCCAAACATGGTATTGTATTTGATAGGAGATTACAGGGTCCGAGTACTGAAAGCAACCAAAATTATGTTCTTTTGGTTTGCCGCTACCAATTTTGCTCCTGTGATTGGTGCTTTTGTGGCTGATGCTTATTTGGGTCGCTTCCTTGCCATTGGTTTAGGTTCAATTCTCAGTTTCCTGGGGATGGCAGTGATGTGGTTAACAGCCATGATCCCAGAGGCAAGGCCTTGCAGCCACTCAACTGAAAACTGCCAATCTGCAGCAACAACAACCCAAATGGCTATCTTACTCTCTTGCTTTGCTCTCATATCCATTGGAGGTGGTGGCATCTCATGCTCCTTAGCATTTGGTGCTGATCAACTCAACCAAAAAACCAAACCCAACAATCAGAGGGTCCTAGAGAGCTTCATAAGTTGGTACATAGCTTCTCAAGCCTTTGCTGTGGTTTTTTCCTTGACCGGAATAGTTTACATCCAAGACCATTTTGGATGGAAAGTGGGCTTTGGGGTTCCAGCAGCACTTATGTTCTTGTCCACTCTCTTTTTCTTCCTCATTTCCCCACGATATGTGAAGCAGAAACCAGACAGCAGCTTGCTCACTGGCTTTGCCCAAGTGCTTGTCGTTGCCTTTAAGAACAGAAAGCTTTCATTTCCACCTAAGGACTCCACTGGCATGCATCACCATAAGAAGGACTCAACCCTTGTTGCTCCAACTGATAAACTAAGGTTTCTAAACAAAGCTTGCATCATCAAAGATAGAGAACAGGACATAGCCTCTGATGGATCAGCCTCAAATAAATGGAGTCTTTGCACAATAGAGCAAGTGGAAGAACTAAAGGCAATCATTAAAGTTATTCCTCTTTGGTCTACCGGTATCATGGTGGCAGTTAGCACTAGCCAAACATCACTTTGGTTGCTCCAAGCCAAAACCATGGACAGACACATCACTTCAAACTTCCAAATTCCAGCAGGTTCTTTCGGTGTATTCATAATGTTGGCGGTGTGTGTAACTGCTGGTGTCTATGATCGTGTCATCCTTCCTCTAGCATCAAAAGTGAGAGGAAAACCAGTTACTATCAGCGCCAAAAAGAGAATGGGAATTGGACTGTTTTTCTCCTTTTTGGACTTTGTAGCTTCAGCAATTGTTGAGAGTATAAGGAGAAGGAAAGCAATTAGGGAGGGATATATTAATAATCCTGAGGCAGTGTTGGACATGTCTGCAATGTGGCTTATCCCACATTATATTTTGAGTGGCATAGCAGAAGCCTTTAATGCAATAGGGCAATCAGAGTTCTATTACTCTGAGTTTCCAAGCAGCATGTCAAGCATTGCTGCATCCCTATTCAGCCTAGGATCTGCTGTGGGAAACTTGGTGGCTTCTCTTATAGTCAGCATTGTGGATGACATTACTTCCAGAGGGGGAAAAGAGAGCTGGGTTTCAGATAACATTAACAAGGGTCATTATGACAAGTATTATTGGCTTCTTGCCATAATGAGTTTTGCTAATATACTCTACTATTTGGTTTGCAGTTGGGCTTATGGCCCTAGTGCTGAAGCAGCTTCAAAGAAGGAAGAAAGAGGGAATAGGGTTCATGATCAACAAGCAGAGGCAATGTAA 1773 0.4354 MEKEMEAALVHVETTHKHMNPHVQLQRRKGGFITMPFIIANEALAKLASVGLMPNMVLYLIGDYRVRVLKATKIMFFWFAATNFAPVIGAFVADAYLGRFLAIGLGSILSFLGMAVMWLTAMIPEARPCSHSTENCQSAATTTQMAILLSCFALISIGGGGISCSLAFGADQLNQKTKPNNQRVLESFISWYIASQAFAVVFSLTGIVYIQDHFGWKVGFGVPAALMFLSTLFFFLISPRYVKQKPDSSLLTGFAQVLVVAFKNRKLSFPPKDSTGMHHHKKDSTLVAPTDKLRFLNKACIIKDREQDIASDGSASNKWSLCTIEQVEELKAIIKVIPLWSTGIMVAVSTSQTSLWLLQAKTMDRHITSNFQIPAGSFGVFIMLAVCVTAGVYDRVILPLASKVRGKPVTISAKKRMGIGLFFSFLDFVASAIVESIRRRKAIREGYINNPEAVLDMSAMWLIPHYILSGIAEAFNAIGQSEFYYSEFPSSMSSIAASLFSLGSAVGNLVASLIVSIVDDITSRGGKESWVSDNINKGHYDKYYWLLAIMSFANILYYLVCSWAYGPSAEAASKKEERGNRVHDQQAEAM 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04218 590 Pfam POT family 101 531 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pumo4g04218 590 SUPERFAMILY MFS general substrate transporter 27 563 IPR036259 -
Pumo4g04218 590 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 89 113 IPR018456 GO:0006857|GO:0016020|GO:0022857
Pumo4g04218 590 CDD MFS_NPF1_2 35 565 - -
Pumo4g04218 590 Gene3D MFS general substrate transporter like domains 5 573 IPR036259 -
Pumo4g04218 590 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 29 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04218 Pumo-Chr4 83074802 83078462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04218 13 585 Organic Solute Cotransporters AT1G52190 57.560 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04218 K26551 - gmx:100782867 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04218 4 83074802 83078462 Pumo7g00235 7 2647644 2652156 PCT