Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04217 ATGGACAAGGAAGTGGAGCTTGGTTCCCTTCAAGTTGAAGGTGAAATGGCGACTCAGCAACACATTTCACAACCACAGAGGCGCAAGGGTGGTCTTGTTACCATGCCTTTCATCATTGCAAATGAGGCTCTTGCGAGGGTGGCTAGTTTGGGCCTTTTGCCCAACATGATACAGTATTTGATGGGGAGCTACAAGCTTCACCTTGCCCAAGCAACCCAGATACTTCTATTGTCCTCTGCTAGCACCAATTTCACGCCTGTTGTTGGCGCTTTCATTGCTGATTCTTATCTGGGTCGATTCCTTGCTGTTGGGTTAGGTTCTGCCATCAGTTTTCTGGGAATGACAGTGCTGTGGTTAACAGCTATGATCCCACAGTCACGGCCTCCCACTTGCAGCAATGGAACTGGAGGAGGCTGTAAATCGGCAACAGGAGGGCAAATGGCAATCTTAATCTCTGCCCTTGCTCTCATGGCTATTGGAAATGGTGGCCTTTCATGCTCCTTAGCATTCGGTGCAGACCAGGTGAATAGAAAAGATAACCCCAACAACCGAAGGGTCTTGGAAACATTCTTCAGCTGGTATTATGCTTCTGCTGCTATTTCTGTCATAATTGCCTTCACAGGAATAGTTTACATTCAAGATCATCTTGGTTGGAAAGTGGGTTATGGAGTTCCAGCAGCACTTATGCTTTTATCTACTGTCTCCTTCCTCCTTGCCTCTCCACTTTATGTAAAGAATAAAGTAGAAACCAGCTTGTTCACTGGATTTGTACAAGTGATTGTTGTTGCCTACAAGAACAGAAAACTTCCATTACCACCTAAGAACTCCCCTGAACTTTACCATCATAAGAAGGACTCGGATCTTGTCTTTCCAACTGATAAACTAAGTTTTCTGAATAGAGCCTGTGTTATTAAAGATCGGGAACAAGATATAGCCTCTGATGGTTCAGCATCAAATCGATGGAGACTGTGCACAGTGGATCAAGTAGAGGAACTAAAAGCCATTATTAAAGTAATTCCCTTGTGGTCTACAGGGATCATGATGTCAGTTAACATTGGAGGGTCATTTGGAGTGCTCCAAGCAAAGTCCCTGGACAGACATATCACCTCACACTTTCAAGTCCCACCTGGCTCTTTTAGTGTAATCATGATAGTTACAATATTTGTATGGATAGCTCTCTATGACCGTGTCCTTATTCCTCTAGCATCAAAGATAAGAGGCAAACCAGTTAGGATCAATGCAAAGAGAAGAATGGGACTTGGCTTGTTTTTCTCTTTTCTCCACCTGGTAACTGCAGCAATTGTTGAGACTACAAGGCGAAGGAGAGCAATCAAGGAGGGATATCTTAACAATACTCATGCAGTGTTGCATATGTCTGCAATATGGCTTGTCCCACAACTTTGCTTGGGTGGCATAGCTGAAGCATTCAATGCAATAGGCCAAAATGAGTTTTATTACACAGAGTTTCCTAGGAGCATGTCCAGCGTTGCTGCTTCCCTTTCTGGATTGGGAATGGCTGCTGGAAACTTGGTATCTAGTTTTGTATTCAGCATGGTACAAAACGTTACTTCAAGAGGGGGAAAAGAGGGTTGGGTTTTAGATAATATTAACAAGGGTCGTTATGACAAGTACTACTGGGTTATTTCTGGACTGAGTGCTCTTAATATAGTGTATTATCTAATATGCAGTTGGGCTTATGGACCTACCGTTGATCAAGTACGTAAGTTAGGTGAAGAAAATGGCTCAAGCGAATTTAGAAATGGGGGTCAGATTAGTAAAGAAAATGGCTCAAAGGAGGAAGAGTTTAATAGTTGA 1815 0.432 MDKEVELGSLQVEGEMATQQHISQPQRRKGGLVTMPFIIANEALARVASLGLLPNMIQYLMGSYKLHLAQATQILLLSSASTNFTPVVGAFIADSYLGRFLAVGLGSAISFLGMTVLWLTAMIPQSRPPTCSNGTGGGCKSATGGQMAILISALALMAIGNGGLSCSLAFGADQVNRKDNPNNRRVLETFFSWYYASAAISVIIAFTGIVYIQDHLGWKVGYGVPAALMLLSTVSFLLASPLYVKNKVETSLFTGFVQVIVVAYKNRKLPLPPKNSPELYHHKKDSDLVFPTDKLSFLNRACVIKDREQDIASDGSASNRWRLCTVDQVEELKAIIKVIPLWSTGIMMSVNIGGSFGVLQAKSLDRHITSHFQVPPGSFSVIMIVTIFVWIALYDRVLIPLASKIRGKPVRINAKRRMGLGLFFSFLHLVTAAIVETTRRRRAIKEGYLNNTHAVLHMSAIWLVPQLCLGGIAEAFNAIGQNEFYYTEFPRSMSSVAASLSGLGMAAGNLVSSFVFSMVQNVTSRGGKEGWVLDNINKGRYDKYYWVISGLSALNIVYYLICSWAYGPTVDQVRKLGEENGSSEFRNGGQISKENGSKEEEFNS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04217 604 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 89 113 IPR018456 GO:0006857|GO:0016020|GO:0022857
Pumo4g04217 604 Pfam POT family 102 532 IPR000109 GO:0016020|GO:0022857|GO:0055085
Pumo4g04217 604 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 29 566 - -
Pumo4g04217 604 Gene3D MFS general substrate transporter like domains 9 574 IPR036259 -
Pumo4g04217 604 CDD MFS_NPF1_2 35 566 - -
Pumo4g04217 604 MobiDBLite consensus disorder prediction 579 604 - -
Pumo4g04217 604 SUPERFAMILY MFS general substrate transporter 28 563 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04217 Pumo-Chr4 83065693 83069087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g04217 17 600 Organic Solute Cotransporters AT1G52190 57.699 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04217 K26551 - gmx:100792940 1048.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04217 4 83065693 83069087 Pumo7g00236 7 2655572 2658654 PCT