Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g04178 ATGTATAGAGCTGCAGCTTCACGTCTCACCCTTCCCAAGGGCAATGGGAGAACCTTGGGAGCCTCTAGATTTGCTTCAAGAGGTTTATTCAGCTGGCTTACTGGGGAATCTTCCAATCCTCTTCCTCCTCTTGACACCCCACTTAGAGGGGTTTCCCTGCCACCTTCACTGCCAGATTATGTTGAACCAAGCAAGACCAAGATCACAACTCTCCCCAATGGTCTAAAAATAGCATCAGAAACCTCACCAAACCCTGCTGCTTCAATAGGGTTATATATTGACTGTGGTTCCCTCTATGAGACGCCATGGTCAAGTGGGGCGTCACACCTGCTAGAGAAAATGTCCTTCAAGAGCACAACAAACCGAAGTCACTTTCGTGTTGTAAGGGAAGTAGAAGCAGTTGGTGGCAATGTAGGAGCCTCGGCCTCTCGGGAGCAAATGGGCTACACTTTTGATGCTCTAAAAACTTATGTTCCACAAATGATTGAGTTGCTGGTTGACTGCGTAAGGAACCCGGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGAAAGGTGAAAGCAGAGCTTGGAGAACTATCAAACAATCCCCAGGGCTTACTTTTGGAGGCAGTGCACTCTGCTGGTTATTCTGGAGCATTGGCTAATCCACTTTTGGCTTCTGAATCAGCACTGAACAGATTAAATAGCTCCATTTTAGGGAAATTCGTTGCTGAGAATTATACTGCATCTAGAATGGTACTTGCCGCATCTGGGGTTGAGCATGAAGAACTTTTATCTGTTGCTGAACCACTTCTCTCTGATCTACCAAGTGTTCCCCACCCCGAAGAACCAAAATCTACATATGTTGGGGGAGAATTTCGTCAACTGTCTCAAGGGCAGGGTGCACATGTAGCTATTGCTTTTGAAGTGCCTGGTGGCTGGAAAACAGAGAAAGAAGCTATTGTTTTGACTGTTCTACAGATGCTTATGGGAGGAGGTGGGTCGTTCTCAGCCGGAGGGCCCGGAAAAGGGATGCACTCAAGGCTGTATCTTCGTGTCTTGAATGAATATCAACAGATTCAATCTTTTTCTGCATTCAACAGTCTCTTCAACAACACAGGGTTATTTGGCATATATGCATGCACAGGCTCTAATTTTGTGGCAAACGCTGTGGATTTAGCAGTCGGAGAATTAATAGCAATTGCATCACCGGGACAAGTTTCACAGGTACAGCTTGATCGTGCCAAGGTATCCACAAAGTCCGCAGTTCTAATGAATTTAGAGTCAAGAATGATTGCATCAGAGGATATAGGAAGGCAGATTTTGACTTATGGAGAAAGGAAGCCAGTGGAGCAGTTCTTAAAGGCAGTAGATGGAATCACTTTGAATGATATCACTAAAGTTTCTCAGAAGATTATATCCTCACCTCTCACTATGGCATCCTATGGGGATGTATTCAATGTCCCCAGTTACGAATCCGTTAGTAGGAAATTCCATGCAAAATGA 1488 0.4516 MYRAAASRLTLPKGNGRTLGASRFASRGLFSWLTGESSNPLPPLDTPLRGVSLPPSLPDYVEPSKTKITTLPNGLKIASETSPNPAASIGLYIDCGSLYETPWSSGASHLLEKMSFKSTTNRSHFRVVREVEAVGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAVHSAGYSGALANPLLASESALNRLNSSILGKFVAENYTASRMVLAASGVEHEELLSVAEPLLSDLPSVPHPEEPKSTYVGGEFRQLSQGQGAHVAIAFEVPGGWKTEKEAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSLFNNTGLFGIYACTGSNFVANAVDLAVGELIAIASPGQVSQVQLDRAKVSTKSAVLMNLESRMIASEDIGRQILTYGERKPVEQFLKAVDGITLNDITKVSQKIISSPLTMASYGDVFNVPSYESVSRKFHAK 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g04178 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 65 275 IPR011249 GO:0046872
Pumo4g04178 495 PANTHER METALLOPROTEASE 59 483 - -
Pumo4g04178 495 Pfam Insulinase (Peptidase family M16) 77 220 IPR011765 -
Pumo4g04178 495 Gene3D - 280 491 - -
Pumo4g04178 495 SUPERFAMILY LuxS/MPP-like metallohydrolase 289 486 IPR011249 GO:0046872
Pumo4g04178 495 Gene3D - 58 268 - -
Pumo4g04178 495 Pfam Peptidase M16 inactive domain 233 410 IPR007863 -
Pumo4g04178 495 FunFam mitochondrial-processing peptidase subunit alpha 280 488 - -
Pumo4g04178 495 ProSitePatterns Insulinase family, zinc-binding region signature. 96 119 IPR001431 GO:0004222|GO:0006508
Pumo4g04178 495 FunFam Mitochondrial-processing peptidase subunit beta 56 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g04178 Pumo-Chr4 82669151 82672853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g04178 K01412 - gmx:100810996 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g04178 4 82669151 82672853 Pumo4g04178 4 82669151 82672853 ECH
Pumo4g04178 4 82669151 82672853 Pumo7g00279 7 3334087 3340098 PCT