Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03930 ATGTTGCTATATAAGGCCACCTTGGGCTGGCCAATTCCCACACAACATAACAACCCAAACCCAATTACAATTCCATACCTTAAGACCTTAACTGTTCCCACAATGTCGTCCATTTTCCGGCAATACACCTTGGACGACTCATTCGAGCAAGTGTTCGTGCCCCCCAAACTCCTGAAGGAGTACCAAATCGCCCTCACCTTCGCCACCGACTACGACGACAACGACGTCCCCACCAACGGCGTCTTCCGACCCACATGGGACCTATCAAAGGTCACTCCCGAATCCATCACGCACTTCAAGGACAAGTGCCGCGACATTAACGTGGACGTCAAAGTCTTTATCTGCATCGGAAACCGCGGCACCCAGCACCCCTTCAAACCCCAAAACAACAAAACCTGGGTTATCCGCGCCACCGAGTCCCTCACGCGCCTCATCAAAAGCCTCCACGTGGACGGCATTGACGTGCTGTACGAACACATCGATGCCTCCCCCGGTGATTTTATCGAGTGCGTGGGACAGCTCATAACGAACCTCAAGAAAGGTGGGGTCATCACCGAAGCTTCCATTTCTCCCTCCTTTGTTCTCAACAAAGACTACTACCCCTCTTTGTACAGTGCTGTCTCGTCCCACATCAATTGGGTCGATTACCAGTTCCAGAACGAGGTTACTTCTGTGATGGACCCCACCACCTTGGTGAATCACTACAATGAACTAGGCAAGGTTTATCCGAGAGAAAAACTGTTTGCTGGATACAGTGCTGAGAACGAAGACTGGGCTACGGTGTCGCCGATCGTGTTCTTTCTGGGTGGCATCGACATTCTCACCAATAAAACAGCTCCTGGTCCTGGTGTTTCCATTCATTACCATAATTACTATGCACAAGCACCACATAAGGAATAA 900 0.5044 MLLYKATLGWPIPTQHNNPNPITIPYLKTLTVPTMSSIFRQYTLDDSFEQVFVPPKLLKEYQIALTFATDYDDNDVPTNGVFRPTWDLSKVTPESITHFKDKCRDINVDVKVFICIGNRGTQHPFKPQNNKTWVIRATESLTRLIKSLHVDGIDVLYEHIDASPGDFIECVGQLITNLKKGGVITEASISPSFVLNKDYYPSLYSAVSSHINWVDYQFQNEVTSVMDPTTLVNHYNELGKVYPREKLFAGYSAENEDWATVSPIVFFLGGIDILTNKTAPGPGVSIHYHNYYAQAPHKE 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03930 299 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 33 299 IPR001223 GO:0005975
Pumo4g03930 299 SUPERFAMILY (Trans)glycosidases 62 261 IPR017853 -
Pumo4g03930 299 Gene3D Glycosidases 36 296 - -
Pumo4g03930 299 PANTHER CHITINASE 2-LIKE 32 290 - -
Pumo4g03930 299 Pfam Glycosyl hydrolases family 18 95 263 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03930 Pumo-Chr4 79896408 79897457 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03930 - - gmx:100776259 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03930 4 79896408 79897457 Pumo4g03930 4 79896408 79897457 ECH
Pumo4g03930 4 79896408 79897457 Pumo11g01533 11 46389651 46389908 PCT