Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03907 ATGCAGACCCCAAAGACAAGAAGCAGTAGTAGCTCCTCTGAAGTGCCTCAGAGAGTGTCCCCTCGTGGTGGACGCCAACTCAGGCCTGCTACACTAGACACTGCATCTTCATTAAACCAACCTAACAAAACATCAAAGGATAATAGAAGTCCCAAAGTCACCGAGCGCAGATCACCCAGAAGCCCCGCTCCAGAGAGGAAGCGTCCTAGCAGAATATCTGAATTGGAATCTCAGAATTCTCAACTCAAAGAGGATTTGAAGGTGGTGAGGAACCAGCTCGGTGTGTCTGAATCATGCAAGAAGCAAGCTCAGCAAGATGCTGAAGAGTCCAAGAAGCAACTAGCTGCCCTATCTTTGAAACTTCAAGATTCTCAACAGCAACTTCAGAAGTTCTCTGCTGCTGAACAAGCTCGTGTTATTGAGCTCCAGAAAACTATAGAGGAGCATGATAAGGCGTGGCAATCCGAGCTCAGGGCTGCCCAACAGAAGCTCTCAGACAACACTGCCGCGCTCACCTCTGCCATCAATGAAATTCAGCAGCTCAAGCTTCAACTTGAATTGGTAGCTAATTGTGAGAATGCACACACCCAAATTGCTGAATCATCAGACGTGGAACTGCTAAACTTGAAGGATAACTTGGCTGAATCTCTTTCTCTTGTGGAGAACATGAAAAACCAACTCAGGGATTCCAAGGAGTCAGCTCAGGCACAAGCTTTGGTCAATGAGACTTTGCGGCAACTTGAGGCTGCAAAAAGAACTGTTGAGTTCCTGAGAGCTGATGCTGCTAAAGCTGTCACTGGCTACAACTCTGCTGCTTTGGAGTTAGATCAATCTAGAGCACGGGTGAACTCACTAGAGGCACTAGTAAGCAAACTTGAGTTTGGCATCATTAGTAACAAATGCAACCGTTCTTTAAATCTTGCAGATGATGATAACATGGAGCTGAAAGCTGAGATATTACAAAAAGGTGAGGATCCTAATCGCATTGAAGCAGAAATTTATTCTTTGAGGTCTGAGGTAGGACAACTGAGGTCTGCCATAGAGACTGCTGAGGCTAAGTACCAGGAAGAACAGATTCAGTGTTCAGTGAAGATCAGGAAAGCCTATGAGTTGATTGAACAGATAAAATCAGAATCAAACCAGAGGGAATCTCAGCTAGAGGCTGAATTGAAAAGAAAGAATGCTGATATTGAAGAGTTGAAGGCCAACCTAATGGATAAGGAAACTGAGCTGCAGGGCATTGTGGAGGAGAATGAGAAGTTGAATTTGCAGGTTGAGAAGAGCATGTCATCACAAAGAGAACATGAATTTATAAAGGAGCTCCGAAAACTAGATGAATGTGTGGCTGGATTGAAAGCTGATCTGATGGACAAGGAAACAACATTGCAAAGCATATCTGAAGAGAATGAAATGCTGAAGTTTGAGATCAGTAAGAGGTTTGCACATGGTGATAGGGAAATGGAGGAAGTTGCTGCAGAACTAGAGGCCGCTAAGGCTGCAGAACGCGAGGCGGTTATGAAACTTGGCATTGTGATGGAAGATGCAGATAGGAGCAACCGAAGGGCGGCGAGGGTGGCTGAGCAACTGGAAGCATCTCAAGCAGCAAATTCAATAATAGAAGCTGAACTAAGAAGATTGAAGGTACAGTCTGATCAATGGAGAAAGGCTGCAGAGGCAGCTGCTGCTATGCTCTCAGCAGGGAACAATGGGAAACTCACTGAGAGATCAATGTCTTTGGACAACAACTATAACTCTATCATGAACAAGTACTCACCATCTTGTGAAGAACTTGATGATGATTTCCAGACAAAGAAGAATGGCAACATGCTGAAGAAGATTGGGGTCTTGTGGAGGAAACCTCAAAAATAG 1869 0.4473 MQTPKTRSSSSSSEVPQRVSPRGGRQLRPATLDTASSLNQPNKTSKDNRSPKVTERRSPRSPAPERKRPSRISELESQNSQLKEDLKVVRNQLGVSESCKKQAQQDAEESKKQLAALSLKLQDSQQQLQKFSAAEQARVIELQKTIEEHDKAWQSELRAAQQKLSDNTAALTSAINEIQQLKLQLELVANCENAHTQIAESSDVELLNLKDNLAESLSLVENMKNQLRDSKESAQAQALVNETLRQLEAAKRTVEFLRADAAKAVTGYNSAALELDQSRARVNSLEALVSKLEFGIISNKCNRSLNLADDDNMELKAEILQKGEDPNRIEAEIYSLRSEVGQLRSAIETAEAKYQEEQIQCSVKIRKAYELIEQIKSESNQRESQLEAELKRKNADIEELKANLMDKETELQGIVEENEKLNLQVEKSMSSQREHEFIKELRKLDECVAGLKADLMDKETTLQSISEENEMLKFEISKRFAHGDREMEEVAAELEAAKAAEREAVMKLGIVMEDADRSNRRAARVAEQLEASQAANSIIEAELRRLKVQSDQWRKAAEAAAAMLSAGNNGKLTERSMSLDNNYNSIMNKYSPSCEELDDDFQTKKNGNMLKKIGVLWRKPQK 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03907 622 Coils Coil 268 288 - -
Pumo4g03907 622 Coils Coil 376 424 - -
Pumo4g03907 622 Coils Coil 100 134 - -
Pumo4g03907 622 MobiDBLite consensus disorder prediction 1 84 - -
Pumo4g03907 622 MobiDBLite consensus disorder prediction 30 47 - -
Pumo4g03907 622 Coils Coil 72 92 - -
Pumo4g03907 622 Coils Coil 206 260 - -
Pumo4g03907 622 Coils Coil 512 549 - -
Pumo4g03907 622 Coils Coil 340 360 - -
Pumo4g03907 622 MobiDBLite consensus disorder prediction 48 83 - -
Pumo4g03907 622 PANTHER INTERACTOR OF CONSTITUTIVE ACTIVE ROPS 2, CHLOROPLASTIC-RELATED 1 622 IPR029688 -
Pumo4g03907 622 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03907 Pumo-Chr4 79550418 79557065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03907 - - gmx:100798050 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03907 4 79550418 79557065 Pumo4g03907 4 79550418 79557065 ECH
Pumo4g03907 4 79550418 79557065 Pumo11g01510 11 46010217 46017540 PCT