Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03904 ATGAGAGGCAGCAACCACTTGATCGGTGTATTAAACTTCTTGAGCTTCTTGCTATCAGTTCCAATCCTCGTGTGTGGGATATGGCTGAGCACCAGAGCCAACAACACAGAATGCCTCAAGTTCCTTCAGTGGCCCTTGATCGTCATAGGAGTGAGCATCATGGTCACATCCCTAGCCGGTTTGGTCGGTGCCTGTTACCGCAACACCGTCCTCATGACCCTCTACCTCCTCGTCATGCTCTTCATACTCTTTGTTCTCGTTGGCTTCATCATCTTTGCCTATGCCGTCACGGAAAAGGGTTCCGGGAGGGAGATACAGAACCGCTCTTACTTGGAGTATTACCTGCAGGACTACGAGGGTTGGTTGGAGAAACGCGTGGCCAGGGATAGCTATTGGAGAAAGATTAGCTCTTGTGTTAGGGACTCTAAGGCTTGTGGCAAGATTGGGAGAATCGTTGATGGGCTCCCTGACACTGAAACTGCTGATATGTTCTACCTTAGAAAGCTCACTCCTATTCAGTCTGGATGCTGCAAGCCCCCAACAGAGTGTGGGTATATCTATCAGAACGAGACAGTGTGGACCCCAGGCGAAGGAGTGGTTGGAAGCAACCCAGACTGCACTAGGTGGAGCAATGACCAACACTTGCTTTGCTATGACTGTGACTCTTGCAAGGCTGGTGTGCTAGCTACTCTCAAGAAAAGTTGGAGGAAGGTCTCTGTGATTAATATTGTTGTGTTCGTTGCCCTTGTCATTGTTTACATCATTGCTTATGCAGCGTACAAGAACAACCGCAAGATAAATAACTGCGAACCCTGCGGTGAAACAAGGATGACAAAAGCACAACCTTAG 849 0.4876 MRGSNHLIGVLNFLSFLLSVPILVCGIWLSTRANNTECLKFLQWPLIVIGVSIMVTSLAGLVGACYRNTVLMTLYLLVMLFILFVLVGFIIFAYAVTEKGSGREIQNRSYLEYYLQDYEGWLEKRVARDSYWRKISSCVRDSKACGKIGRIVDGLPDTETADMFYLRKLTPIQSGCCKPPTECGYIYQNETVWTPGEGVVGSNPDCTRWSNDQHLLCYDCDSCKAGVLATLKKSWRKVSVINIVVFVALVIVYIIAYAAYKNNRKINNCEPCGETRMTKAQP 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03904 282 PANTHER TETRASPANIN-8-RELATED 1 266 IPR044991 GO:0009734|GO:0016020
Pumo4g03904 282 Pfam Tetraspanin family 6 256 IPR018499 GO:0016020
Pumo4g03904 282 PRINTS Transmembrane four family signature 39 65 - -
Pumo4g03904 282 PRINTS Transmembrane four family signature 6 29 - -
Pumo4g03904 282 PRINTS Transmembrane four family signature 66 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03904 Pumo-Chr4 79509766 79513382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03904 1 279 Miscellaneous Gene Families AT5G60220 65.233 6.05e-120 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03904 - - gmx:100820399 461.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03904 4 79509766 79513382 Pumo4g03904 4 79509766 79513382 ECH
Pumo4g03904 4 79509766 79513382 Pumo11g01509 11 45977572 45982547 PCT