Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03871 ATGTTTTGGAAGCTCGCTTCTCTTTCTGCTTCCTCCCCCGTGGAGGCAATATTAGACAAGGAGAATTTCACTTTGGAAGAGCTTCTGGATGAAGAGGAAGTGATCCAAGAATGCAAGGCCTTAAACAGTCGGCTTATCAACTTTCTGAGAGATCAAGCCCAGGTTGAGCAATTGTTACGATACATTATTGAAGAACCACCAGAAGATGCTGAAAATAAACGGGCCTTCAAGTTTCCATTCATTGCCTGCGAGGTTTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTTGATGACGAAGAGCTGATGAACTTATTATTCTCCTTTTTGGAGCCTAATCGCTTACATAGTACCTTGTTGGCTGGCTACTTTAGCAAGGTTGTTGTTTGCCTAATGATTCGAAAGACAGTGCCACTTATGAATTATGTTCAAGCCCATCAGAATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGCGCTGATGACCATGTGTATCACAATTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTTGAGATGATTGTTGATAAATTGAGTCCATCTGTAAGTGAAGCATCTATCCAGAGTCCTCCTGAAGTTCATGCCAATGCTGCTGAAACATTGTGCACAATAACACGAAATCCCTCATCTACTCTAGCAATTAAACTTTCAAGCCCAAGTTTTGTTGCAAAAATTTTGGATCATGCATTGGAAGATTCACAATCAAAGTCTAGCCTTGTGAACTCACTTTCAGTGTGTGTTTCTTTATTGGATCCCAAAAGATCTTCTATATCATCTCCCCTTTTTCATTCATTTCGAAGTCAACACATGTATGAGCCACCAATTCCTGTAAACCCAGACACTATTGGTGCAATGCTACCTAAACTCAGTGAATTGCTTATGCTTTTGAATGTATCATCTGATGAAAAAGTATTGCCTACAACATATGGAGAATTGAGACCTCCACTTGGAAAGCATCGATTAAAGATTGTTGAGTTCATTGCTGTCCTTCTAAAAACTGGAAATGAAGTAGCAGAAAAAGAAATGGTCAATTCAGGAACCATTAAACGAGTCATTGACCTCTTCTTTGAGTATCCATATAATAACTCCTTACACCATCATGTAGAAAGTATAATATTATCATGTTTGGAGAGCAAAACAGATGCCATTGTTGAACATCTTCTCCGAGAGTGTGATTTAATTGGAAGATTTCTCCAAGCAGACAAACGCTCTATTCTCTCTGCTGACATAAATCTGCCAACTGTACCTGCTGCTGGAAAACAGGCACCACGGGCAGGAAACATTGGTCATATTACTCGAATTGTTAACAAACTTGTTCACTTGGCACATAATCGAAACCTCATACTGACATGTCTTCAGGAAAATAGTGAGTGGAATGAATGGCAAGCTACAGTTCTTCAGGAGCGTAATGTGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGTCCGACTGCTTTACAAGATAGGATGAGGGATAGTGATGATGATGAACTTCATGACAGGGACTATGATGTTGCAGCTCTAGCAAATAATTTGAGCCAGGCGTTTAGATATAAAATTTATGGGAATGAGGATAACGAGGAGGAACGTGGCAACCTTGATCGAGATGATGAGGATGTCTACTTTGATGATGACTCTGCTCAAGTAGTCATATCATCCCTCAGACTCAGTGATGATCAAGGGAGTAGTCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGAATTGGTGATGCAACTGGGGGCACAACATCATCAGAGGTGATGGATGAGATAAACTTGAATGGTTCTGCAAATGGTGGTAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAGTTGGATGAAAGCAAAAATAATCTGAATGGTACATCTAGCACAAGCACAAACTTAAATGGAATAACTGGTAATGATTCCATGAATGGAGACGCCTTCAACAACTTTGAAAGCAAAAAGGCAAGCGCTTCACATGATATGGGATTCTTCAGGTTTGAGGCATCGGACAATGAAGAGTTGTTTGGGGACAGGCCTTTGCCTGATTGGGTGGGATGGGGTGAACCTTCAGATATGCAAGATGCCGGCTCAAGCAAGAATCCATTTATAGATCATGATGATTCTTCTGGTAGCAACCTTTCTACCAAACCTCAAATAGTTAGCCCTAATCCTAGTCCTCCTTCAAATGGGGAATCTGTTCCTTCAAACAGGTCACCAACTAAAGATAAGATTGATGGGGGTGTTGACTCGAGTCAAAGATCAGTAGCAGTACCATCGCTCTTTGAAGAAGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACCGAGAAGGCTATGGAACAGGCTCTGAAAGAAGGGATAGTTGGGGAGGCAGGACCATTGAAAAGAAACATGGTCTCCAAAGTGCCAGAAAAGGAAAGCACTGATGAGGGTGGTCCTGGAATAAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCACGAGGTTGCTGTTCTGGAGTGA 2580 0.412 MFWKLASLSASSPVEAILDKENFTLEELLDEEEVIQECKALNSRLINFLRDQAQVEQLLRYIIEEPPEDAENKRAFKFPFIACEVFTCEIDVILKTLVDDEELMNLLFSFLEPNRLHSTLLAGYFSKVVVCLMIRKTVPLMNYVQAHQNVFRQLVDLIGITSIMEVLVRLVGADDHVYHNFIDVMQWLAESNLLEMIVDKLSPSVSEASIQSPPEVHANAAETLCTITRNPSSTLAIKLSSPSFVAKILDHALEDSQSKSSLVNSLSVCVSLLDPKRSSISSPLFHSFRSQHMYEPPIPVNPDTIGAMLPKLSELLMLLNVSSDEKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNEVAEKEMVNSGTIKRVIDLFFEYPYNNSLHHHVESIILSCLESKTDAIVEHLLRECDLIGRFLQADKRSILSADINLPTVPAAGKQAPRAGNIGHITRIVNKLVHLAHNRNLILTCLQENSEWNEWQATVLQERNVVENVHRWACGRPTALQDRMRDSDDDELHDRDYDVAALANNLSQAFRYKIYGNEDNEEERGNLDRDDEDVYFDDDSAQVVISSLRLSDDQGSSLFTNSNWFAFQDDRIGDATGGTTSSEVMDEINLNGSANGGNSSDDEVVVGEDEELDESKNNLNGTSSTSTNLNGITGNDSMNGDAFNNFESKKASASHDMGFFRFEASDNEELFGDRPLPDWVGWGEPSDMQDAGSSKNPFIDHDDSSGSNLSTKPQIVSPNPSPPSNGESVPSNRSPTKDKIDGGVDSSQRSVAVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRNMVSKVPEKESTDEGGPGIKEFNDANYWRVDHEVAVLE 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03871 859 MobiDBLite consensus disorder prediction 646 662 - -
Pumo4g03871 859 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 823 IPR007587 GO:0019903|GO:0043666
Pumo4g03871 859 MobiDBLite consensus disorder prediction 619 662 - -
Pumo4g03871 859 MobiDBLite consensus disorder prediction 823 842 - -
Pumo4g03871 859 MobiDBLite consensus disorder prediction 705 781 - -
Pumo4g03871 859 Pfam SIT4 phosphatase-associated protein 131 364 IPR007587 GO:0019903|GO:0043666
Pumo4g03871 859 Pfam SIT4 phosphatase-associated protein 364 497 IPR007587 GO:0019903|GO:0043666
Pumo4g03871 859 MobiDBLite consensus disorder prediction 718 744 - -
Pumo4g03871 859 MobiDBLite consensus disorder prediction 824 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03871 Pumo-Chr4 79052540 79062370 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03871 K15501 - gmx:100777597 1518.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03871 4 79052540 79062370 Pumo4g03871 4 79052540 79062370 ECH
Pumo4g03871 4 79052540 79062370 Pumo11g01454 11 45013988 45020582 PCT