Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03856 ATGCGTGCAGCGGAGTTTAATTATAACCTTTCAAGCCCGAATGGGCCATTTAACTGGGGAAATAATCCCCAGTGGCAGTTGTGTAGAACTGGAGACAGGCAATCGCCTATCAACTTGCAGATACACACTGCTGATGTGGTGTTCAACTCCGGGATTCAAAGGAACTATCAACCTGCCAATGCCACCCTTGTTAGTACCGAGCATGACGTAATGGTAAATTGGACTGCGAATGCAGGGTATATTACAATTAACGGAACTCAATACCAACTCGTACAAGGTCATTGGCATTCGCCCTCTGAACACAGAATCAACGGCAAAAGGTATGATCTAGAGTTACACATGGTGCATAGCAGTTCAGATGGAAGACTAGCAGTGACTGGAGTTCTATATAAGATTGCTAGGAGATCAGATGATCAGTTCATATCAACGATAGAAGATGTTTTACAGTTGATGGCTGACAACCAGACCAGTGCAAGTCCACTAGGTATTGTTGACCCAGAGGAGGTAGCAGGGATAACAGGCCAGAAGTATTTTAGATATAATGGTTCTCTTACAGTTCCTCCTTGCTATGAAAATGTTATTTGGACCGTTTTCATTAAAGAGGACAAAACAGTTTCAAGGGAACAAGTCCAGTTGATTCAAGCAGCTGTTAATGGTGATGAACAATATGTGAATGCTAGACCGGTGCAACCAAGCAACAACCGCCCGGTGCAACTCTATAAAGATCGCGAAGGAAATTGA 741 0.4345 MRAAEFNYNLSSPNGPFNWGNNPQWQLCRTGDRQSPINLQIHTADVVFNSGIQRNYQPANATLVSTEHDVMVNWTANAGYITINGTQYQLVQGHWHSPSEHRINGKRYDLELHMVHSSSDGRLAVTGVLYKIARRSDDQFISTIEDVLQLMADNQTSASPLGIVDPEEVAGITGQKYFRYNGSLTVPPCYENVIWTVFIKEDKTVSREQVQLIQAAVNGDEQYVNARPVQPSNNRPVQLYKDREGN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03856 246 SUPERFAMILY Carbonic anhydrase 5 237 IPR036398 -
Pumo4g03856 246 SMART Carb_anhydrase_2a 8 241 IPR001148 -
Pumo4g03856 246 CDD alpha_CA_prokaryotic_like 15 239 IPR041891 -
Pumo4g03856 246 ProSiteProfiles Alpha-carbonic anhydrases profile. 4 241 IPR001148 -
Pumo4g03856 246 ProSitePatterns Alpha-carbonic anhydrases signature. 99 115 IPR018338 GO:0004089|GO:0008270
Pumo4g03856 246 Pfam Eukaryotic-type carbonic anhydrase 15 239 IPR001148 -
Pumo4g03856 246 Gene3D Alpha carbonic anhydrase 3 245 IPR036398 -
Pumo4g03856 246 PANTHER CARBONIC ANHYDRASE 5 235 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03856 Pumo-Chr4 78899090 78901817 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03856 K01674 - gmx:102660002 400.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03856 4 78899090 78901817 Pumo11g01432 11 44705082 44707990 PCT