Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03855 ATGGCAATTAAAACGGAGAAAATTGCTACCATGGTTTTCATTTGCTGTTTATTTACGGCACTTTTGTTCCTCTCTTTACCAGTGATGTCTCAAGAAGTTGAAGATGAGAGGGAGTTTAGTTACGACGAAGAGAGCGAGAATGGACCATCAAATTGGGGAGACATACACCCCGAATGGAGTTTGTGCAACGATGGATCCATGCAGTCGCCGATTGATCTATTGAATCAGAGGGTTCAAATAGTTTCCCATCTAGGGAGGCTTCAGATTAACTACCAACCCTCTAATGCCACTATTAAGAATAGGGGCCACGATATCAAGCTAGAATGGGTTACAGGCGCAGGCTATCTCCAAATTAATGAAACTAAGTACGTACTCAAACAGTGTCATTGGCATTCTCCCTCTGAACACACCATAGACGGTAAAAGGCTTGATCTAGAGTTACACATGGTGCACGAAACTCCATCAGGACAATCTGCTGTGATTGGAATACTGTACAAGATTGGATCAAGACCAGATTCTTTCTTGTCATCGTTAACGGATCATTTAAAGGCCATTTCTGATACCACGGAAGCAGAAAGAGTGGTGGGTGTAGTTGACCCTAGGCAAATCAAAATATTCTACAAGCAGTATTACAGGTATATTGGTTCACTGACAATTCCTCCTTGCACTGAGAATGTTTCATGGACCATCGTTAGAGAGATACGATCCGTTTCAAAGGAACAAGTTAGATTGCTTCGAGTCTCTGTTCATGATGAATCAGATACTAACGCAAGGCCACTGCAACTAATAAATAACCGCTTGGTGCAACTCTATGGTCCAAAATATATTAAAGATAAACATTGA 843 0.414 MAIKTEKIATMVFICCLFTALLFLSLPVMSQEVEDEREFSYDEESENGPSNWGDIHPEWSLCNDGSMQSPIDLLNQRVQIVSHLGRLQINYQPSNATIKNRGHDIKLEWVTGAGYLQINETKYVLKQCHWHSPSEHTIDGKRLDLELHMVHETPSGQSAVIGILYKIGSRPDSFLSSLTDHLKAISDTTEAERVVGVVDPRQIKIFYKQYYRYIGSLTIPPCTENVSWTIVREIRSVSKEQVRLLRVSVHDESDTNARPLQLINNRLVQLYGPKYIKDKH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03855 280 CDD alpha_CA_prokaryotic_like 48 270 IPR041891 -
Pumo4g03855 280 Gene3D Alpha carbonic anhydrase 35 275 IPR036398 -
Pumo4g03855 280 PANTHER CARBONIC ANHYDRASE 36 266 IPR023561 GO:0004089|GO:0008270
Pumo4g03855 280 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 272 IPR001148 -
Pumo4g03855 280 SUPERFAMILY Carbonic anhydrase 38 268 IPR036398 -
Pumo4g03855 280 SMART Carb_anhydrase_2a 41 272 IPR001148 -
Pumo4g03855 280 FunFam Alpha carbonic anhydrase 3 36 275 - -
Pumo4g03855 280 Pfam Eukaryotic-type carbonic anhydrase 47 269 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03855 Pumo-Chr4 78858854 78861886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03855 K01674 - gmx:100810249 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03855 4 78858854 78861886 Pumo4g03855 4 78858854 78861886 ECH
Pumo11g01432 11 44705082 44707990 Pumo4g03855 4 78858854 78861886 PCT