Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03625 ATGTCATATAATATTCCTCCTGAACTGTGCATGATAAAATCGTGGTGGAAGGACATTGGCCTCGCATGCAAACTGAACTTTGCGCGAGACAGATTAATGGAATCTTTCTTTTGGTGCGTAGGAGTATTCCCTGAACCTCAATTCGCTAACTGCCGCAAAGAACTCACTAAAGTGGCAACGCTAGTCACAGTCCTAGATGATGTATACGATGTCTATGGAAATCTCGATGAATTGGAGCTCTTCACAGATGCCGTTGAGACGTTTGTTCATCAGATAAGAGGAAGTTTATTTTGGTTTTACTTCCAATTAATATGA 315 0.4095 MSYNIPPELCMIKSWWKDIGLACKLNFARDRLMESFFWCVGVFPEPQFANCRKELTKVATLVTVLDDVYDVYGNLDELELFTDAVETFVHQIRGSLFWFYFQLI 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03625 104 Pfam Terpene synthase family, metal binding domain 8 87 IPR005630 GO:0000287|GO:0010333|GO:0016829
Pumo4g03625 104 Gene3D Farnesyl Diphosphate Synthase 8 87 IPR008949 -
Pumo4g03625 104 PANTHER OS04G0344100 PROTEIN-RELATED 8 88 - -
Pumo4g03625 104 SUPERFAMILY Terpenoid synthases 8 88 IPR008949 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03625 Pumo-Chr4 75216931 75230164 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03625 K12742 - pvy:116123255 111.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03625 4 75216931 75230164 Pumo4g03625 4 75216931 75230164 ECH
Pumo4g03625 4 75216931 75230164 Pumo11g01177 11 41025093 41029866 PCT