Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03476 ATGGCCAACTTCCTCGCTCAGTTCCAGACAATTAAGAACACCTCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGATTTGTGGCCAACTGTCAAGCCTGCTTTTGAGGGGCGATTGCCGTTCAAAAGGGCGACTTTGAATAACAAGACACGGAACCCTGTCTTTGTTGAGACATTGCCAGCCGAGTTCATATTAACTACAGATTCAAGACTACGTAGCCGGTTCCCTCAGGAGCAATTTTTATTTTGGTTCCGAGAGCCGTATGCGACTATTGTACTTGTCACCTGTGAGGATCTAGATGAGTTCAAAACCATCCTTAAACCACGCTTGAAATTAATTGTCCAAAATGACGAAAGGGAGTGGTTTGTTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCAAACAAAATGGCGAAGAAAGTATATGCTAAACTCGAAGTTGAGTTTAACACCAAAAAAAGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACCCTGGATAGGCGTGTACAATTTTATGAGGATGAGATACGAAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAATTTCTGTAATTTTTTCATTTTGAAGGAAAGCTTGGCATTTATGTTTGAAATGGCTCACCTTCACGACGATGCCTTACGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGGCTGGAAAGCAGAGAGACTTTGGAGGGGCAGATCATGGTAACGATCAGGCAGCATTGGTTAATCCAGGAAATAAAGCATTGATACAGATCGTTCAAGAGGACTCATTTCGGGAGTTTGAATTCAGACAGTATCTATTTGCCTGTCAATCAAAGCTTTTGTTCAAGCTAAATCGTCCCATTGAGGCTGCATCACGAGGCTATTCATTTATAATAAGCTTCTCAAAATCCTTGGCAGTGCATGAGCGTATTCTCCCTTTTTGTATGCGTGAAGTCTGGGTAACAACTGCTTGCTTGGCTTTAATTGAAGCAACCACTTCTAATTATAAAGATGGACATGTGGCACCTGACATAGAGAAGGAGTTCTTTCGTCTTCTGGGTGACCTATATTCTCTAGCTAGAGTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTATGGAACTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCAGTTCCTGCTGACGCATCAACGGAGGTGCTTGAGAAAGAAAAGCTGATTCTCCAAACAACTTCTAGAACCAAGCACTTTGGTATCCAGAGGAAACCGCTGCCTCTTGAACCTACTGTTCTTCTACGAGAGGCCAACAGGCGGAGAGCTTCACTCTCAGCTGGAAATGTGTCTGAAATGTTGGACAATCGCCAGGGTCCAATGGATGGATCAGGTTTCGATGCATCCACAAGAATGTCACCACAAAAAGCACTTGCAAATTCCATGTCACGAACAAATTCTTCACCAGGAAACTTTGATGGCTCAATTGATCGACCGATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAACAAACAATTTCTAATTCAGAACTGTGGAAATCGTTATCATCATCTGAGGAGTTTGAGCAAAAATATCTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTGTCGATTTTAAGCATGGACATTTTGATCAAGCTGCAAAGTCATATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGATACTTAATGATCAAGCTGGCTACTTGTTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGTCAAGCCTTTCAGTCAGAAGTTGTTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTATGTGATAGGGATCCCGGCATCCTTTCTGTAACTCTATGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAAACGCAACATATAATACTGATGAAGGTGTAAAGGCATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGATCTTATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCATAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAGCCCGCTAAACCCATTCTGAAGGTTTTCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAAGACCAATGGGTTGGCATTTTAGTTCGACCAGTAAATTACTCCCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCAGGGTTGGAGATTAAAGAGTCACACGTAATTGAGATGGAAAGCTGTGCTGGTGTATCACAGAAAGATGATGACCAGGTGCAGAATGATGGTGCTCAAATAAGAACTCTAAATTCTGATAAAATATTTGAACGTTTAACTCTTATTGACGGTAAAATAGAATTTCCAAATTGGGCAAGTGACACTCCTTCTATTCTTTGGGTTCTGGTTCATGCCATCAGTGACACACTCAGCAGAGGATCTTCTTCAGCCACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAGCTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACATATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGACCATATACGATGCTTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGACCTAATTCAAGTTTCTTCCCACTAATCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGACAAGACAAATGCAGAAGAAGCCAGGAAGCAACCAGAAAGCATATTAAATATCAAATACGGAATTTCTGGCGATAGAACAATTGGAGCCCACCCTCCTGTCATGAATGAATCTACTGGAGCTGATGGCGCCAGACAAGAGTTAATCTTCAGGAGTGCAATTACTTTGCAGAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTTCCTTCAGATGGCCTAAGAGTTGGACAACTAGTTAAGATGCAATGGAGAGTGGAAAGGTTGAAGGATTTGGATGAGGAAGGAGTTTCTAAACAGAATGATGAGGTGCTATATGAGGTAAATGCAAATTCTGGAAACTGGATGATAGCCGGAAGGAAAAGAGGATATGCATCTCTGTCCACAAAACAAGGCGCAAGAATAGTTATCTCAGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGCCCTCCCCTACTTGGTCTGCCAGATGTTGATGAGGCAAATATAAGCTGCAAACCTGCTGGCCCACATCTGGTGTGTGTTTTGCCACCTCCTCTCAGCTCCTCCTTCTGCATTCCAGTTAGTTCATGA 3774 0.4224 MANFLAQFQTIKNTSDRLVISVEDVSDLWPTVKPAFEGRLPFKRATLNNKTRNPVFVETLPAEFILTTDSRLRSRFPQEQFLFWFREPYATIVLVTCEDLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYAKLEVEFNTKKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYLETVNMAGKQRDFGGADHGNDQAALVNPGNKALIQIVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAASRGYSFIISFSKSLAVHERILPFCMREVWVTTACLALIEATTSNYKDGHVAPDIEKEFFRLLGDLYSLARVKFMRLAYLIGYGTDIERSPVNSASLSLLPWPKPAVWPSVPADASTEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVSEMLDNRQGPMDGSGFDASTRMSPQKALANSMSRTNSSPGNFDGSIDRPMRLAEIFIAAEHALKQTISNSELWKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVDFKHGHFDQAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTLWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEDQWVGILVRPVNYSLKAAVLHIDTGPGLEIKESHVIEMESCAGVSQKDDDQVQNDGAQIRTLNSDKIFERLTLIDGKIEFPNWASDTPSILWVLVHAISDTLSRGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHTGQTEGRPNSSFFPLIISPTSKAGILFSICLDKTNAEEARKQPESILNIKYGISGDRTIGAHPPVMNESTGADGARQELIFRSAITLQRPVLDPCLAVGFLPLPSDGLRVGQLVKMQWRVERLKDLDEEGVSKQNDEVLYEVNANSGNWMIAGRKRGYASLSTKQGARIVISVLCMPLVAGYVRPPLLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIPVSS 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03476 1257 Coils Coil 185 205 - -
Pumo4g03476 1257 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 8 1254 IPR045126 GO:0048193|GO:1990071
Pumo4g03476 1257 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1139 1216 IPR022233 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03476 K20307 - gmx:100787264 2420.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03476 4 72808718 72822626 Pumo4g03476 4 72808718 72822626 ECH