Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03465 ATGGCTCTCCAGGCTGCTTCTCTTGTACCTGCTTCTTTCTCCGTTCCTAAAGAGGGAAAGAGTGGTGTATCTCTCAAGGACTCCACTCTGTTCGGTCTTTCATTGTCAGAACCTATCAAAGCTGACTTCAGCTCTTCTGCATTGAGGTGCAAGAGGGAATTCCAACAAAAATTTGGTGCTGTGAGGGCCGAGACAGTGGCTACAGCCTCTCCAGCAGTTACCAAGTCCACACCAGAAGGCAAGAAAACATTGAGGAAGGGCAGTGTTGTGATAACTGGGGCTTCCTCTGGACTAGGCCTGGCCACTGCTAAGGCTTTGGCTGAGACAGGAAAATGGCATGTAATAATGGCCTGCAGGGATTACCTCAAAGCTGCAAGAGCTGCAAAATCTGCTGGCATGGCTAAGGAAAACTACACCATTATGCACTTGGACCTTGCCTCTCTTGACAGTGTTCGCCAATTTGTTGATAACTTCAGAAGGTCGGAAATGCCACTGGATGTACTGGTTTGCAATGCTGCTGTTTACTTGCCAACAGCTAAGGAACCTACCTTCACTGCTGAGGGCTTTGAACTTAGTGTTGGGACAAATCATCTGGGGCATTTCCTCCTTGCGCGCCTGTTGCTTGAGGACTTGAACAGATCTGATTACCCTTCAAAGCGCTTGATCATTGTCGGTTCAATCACAGGGAACACAAACACATTGGCTGGTAATGTACCTCCCAAGGCTAACCTTGGTGACTTGAGGGGACTTCAGGGTGGTTTGAGTGGGCTAAACAGTTCAGCCATGATTGATGGTGGAGACTTTGATGGTGCCAAGGCATACAAGGACAGCAAAGTCTGCAACATGCTCACAATGCAAGAATTCCACAGACAATACCACGAGGAAACTGGAATCACATTCGCTTCGCTCTACCCCGGTTGCATTGCCACAACAGGTTTGTTCAGGGAGCACATTCCCTTGTTCAGAACTCTATTCCCTCCATTCCAGAAGTACATAACCAAGGGCTTTGTCTCAGAAGATGAAGCAGGAAAGAGACTTGCTCAGGTTGTGAGTGAACCAAGCCTAACAAAATCTGGTGTTTACTGGAGCTGGAACAAAGCATCTGCTTCATTTGAAAACCAGTTGTCACAGGAGGCTAGTGATGCAGAGAAGGCTCGTAAGGTCTGGGAGATTAGTGAGAAACTCGTTGGTTTGGCCTAA 1200 0.4783 MALQAASLVPASFSVPKEGKSGVSLKDSTLFGLSLSEPIKADFSSSALRCKREFQQKFGAVRAETVATASPAVTKSTPEGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMACRDYLKAARAAKSAGMAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLVCNAAVYLPTAKEPTFTAEGFELSVGTNHLGHFLLARLLLEDLNRSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLQGGLSGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRQYHEETGITFASLYPGCIATTGLFREHIPLFRTLFPPFQKYITKGFVSEDEAGKRLAQVVSEPSLTKSGVYWSWNKASASFENQLSQEASDAEKARKVWEISEKLVGLA 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03465 399 Gene3D - 73 399 - -
Pumo4g03465 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 366 IPR036291 -
Pumo4g03465 399 PRINTS Glucose/ribitol dehydrogenase family signature 88 105 IPR002347 -
Pumo4g03465 399 PRINTS Glucose/ribitol dehydrogenase family signature 296 313 IPR002347 -
Pumo4g03465 399 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Pumo4g03465 399 CDD LPOR_like_SDR_c_like 86 398 - -
Pumo4g03465 399 Pfam short chain dehydrogenase 89 231 IPR002347 -
Pumo4g03465 399 PANTHER PROTOCHLOROPHYLLIDE REDUCTASE C, CHLOROPLASTIC 1 399 IPR005979 GO:0016630
Pumo4g03465 399 NCBIfam protochlorophyllide reductase 85 399 IPR005979 GO:0016630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03465 Pumo-Chr4 72602560 72605367 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03465 K00218 - gmx:100785637 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03465 4 72602560 72605367 Pumo4g03465 4 72602560 72605367 ECH