Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03464 ATGGCCGATCGCTTCTTTCCGAACGAGCTGCCACGCTTCATGGCAGAGACCACAGACCAAACTCCACCAACAGACTCTCTCACTGTCCTTCTCTCTCTCCCTTACGAAACCCTCTCTGCAAAGTTCCAAGCTTCTGCATTTCACTTGAAACAATCGGTGGTGAGGGAGACATGGGGGGCACGTGGGAAGCGTGTGAAGGATTATTCGCTTTACACGGGGGCTCTTGGGACAGCATACCTGCTTTTCAAGGCCTACCAAGTAACCAAGGACGGGAATGATCTTAGCTTGTGCTCAGAGATTGTTAAGGCTTGTGATTCTGCTTCAGCAGATTCTGGTAAAGTGACATTTATCTGTGGGCGTGCTGGTGTTTGTGCTCTTGGTGCTGTCATAGCTAAGCATACTGGTGATGAAAGACTACTTGACTATTATCTGAGACAATTCAAAGAGATTGCGATACCTCGTGATTCGCCCTATGAGCTATTGTATGGCAGAGCAGGTTACTTATGGGCTTGTTCATTCTTAAACAAGCATATTGGTAACAACACAATACCTACTACCCACATGAGATCAGTTGTAGATGAAGTTATTACGGCTGGCAGACAATTAGGTCACAAGGGAAGATGTCCTCTGATGTATGAATGGCATGGGAAGAAATACTGGGGTGCTGCTCATGGACTAGCAGGAATTATGCATGTTTTGATGGACATGGAACTCAAGCCAGATGAGGTGGAAGATGTCAAGGGTACCCTATGTTACATGATTAAGAATCGTTTCCCTAGTGGCAATTACCCCTCCAGTGAAGGAAGTGAAAATGACCGTCTTGTGCATTGGTGTCATGGTGCTCCTGGACTCACTCTTACCCTTGTAAAGGCAGCTGAGGTTTTTGGGGACAAGGAATTTTCGCAAGCAGCTGTAGATGCAGGGGAAGTAGTATGGAAGAGGGGTCTGCTTAAGCGAGTTGGGATCTGCCATGGCATCAGTGGGAACACCTATGTCTTTCTTTCCCTTTACAGATTGACAGGAAATGAGGAGTACTTGTACAGGGCCAAAGCATTTGCTTGTTTCCTACTTGATAGGGCACAAAATCTGATCTCAGAAGGAAAAATGCATGGAGGAGATCGCCCCTATTCCTTATTTGAAGGTCTTGGAGGAATGGCATATACTTGTCTAGATATGGTTGATCCACAAATGGCAAAGTTTCCAGGCTATGAACTTTGA 1218 0.4598 MADRFFPNELPRFMAETTDQTPPTDSLTVLLSLPYETLSAKFQASAFHLKQSVVRETWGARGKRVKDYSLYTGALGTAYLLFKAYQVTKDGNDLSLCSEIVKACDSASADSGKVTFICGRAGVCALGAVIAKHTGDERLLDYYLRQFKEIAIPRDSPYELLYGRAGYLWACSFLNKHIGNNTIPTTHMRSVVDEVITAGRQLGHKGRCPLMYEWHGKKYWGAAHGLAGIMHVLMDMELKPDEVEDVKGTLCYMIKNRFPSGNYPSSEGSENDRLVHWCHGAPGLTLTLVKAAEVFGDKEFSQAAVDAGEVVWKRGLLKRVGICHGISGNTYVFLSLYRLTGNEEYLYRAKAFACFLLDRAQNLISEGKMHGGDRPYSLFEGLGGMAYTCLDMVDPQMAKFPGYEL 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03464 405 Gene3D - 1 405 IPR012341 GO:0005975
Pumo4g03464 405 CDD euk_LANCL 70 401 - -
Pumo4g03464 405 PRINTS LanC-like protein superfamily signature 320 333 IPR007822 GO:0031179
Pumo4g03464 405 PRINTS LanC-like protein superfamily signature 375 392 IPR007822 GO:0031179
Pumo4g03464 405 PRINTS LanC-like protein superfamily signature 274 294 IPR007822 GO:0031179
Pumo4g03464 405 PRINTS LanC-like protein superfamily signature 219 235 IPR007822 GO:0031179
Pumo4g03464 405 PRINTS LanC-like protein superfamily signature 67 85 IPR007822 GO:0031179
Pumo4g03464 405 PRINTS LanC-like protein superfamily signature 158 173 IPR007822 GO:0031179
Pumo4g03464 405 PANTHER LANC-LIKE PROTEIN 1 405 - -
Pumo4g03464 405 FunFam LanC-like protein 2 1 405 - -
Pumo4g03464 405 SMART LANC_like_2 64 405 IPR007822 GO:0031179
Pumo4g03464 405 Pfam Lanthionine synthetase C-like protein 65 405 IPR007822 GO:0031179
Pumo4g03464 405 SUPERFAMILY LanC-like 64 405 - -
Pumo4g03464 405 PRINTS Eukaryotic LanC-like protein family signature 254 269 IPR020464 -
Pumo4g03464 405 PRINTS Eukaryotic LanC-like protein family signature 336 354 IPR020464 -
Pumo4g03464 405 PRINTS Eukaryotic LanC-like protein family signature 208 220 IPR020464 -
Pumo4g03464 405 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Pumo4g03464 405 PRINTS Eukaryotic LanC-like protein family signature 291 312 IPR020464 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03464 Pumo-Chr4 72599396 72602476 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03464 - - gmx:100786158 801.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03464 4 72599396 72602476 Pumo4g03464 4 72599396 72602476 ECH