Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03461 ATGGGAGACCGTTGTAGACACTTTTCCATTGAGGAATTGCCATTACATTTGGTTTTAGAAATTCTTTGCTCGGGCAGGCTCAGTGCAATGGACCTTGTTTGTTTAGAATTGACTTCCAAAACTTTTGGCGGTAGTCATGGTTTGTACCCTTTCAAGTTCAAGTCCTTGGTTGACTTTGCTGCATTTCAATTGTGTGCCTCCCATCTTACCTATGCAAAGATGGGTTTGAATTCTCAGAGGGAGTTGTATGATAGATGTGGAGGAAATTGGAAGCGAGTTTTGAGGTTCTTGCAGTCTGTGGAACAATCCTCTCAGATGGTCGAGACATCATCAGGCAATATGCAAATAACAACTGGAAAGTATCACACCTTGTTGATCAGCAATTCTTCTGTCTATTCTTGTGGTTCTGGTTTGTGTGGTGTACTTGGTCAAGGGTCTGAAACAACACAGTGTGTAGCATTTACCCGGATTGATTTCCCACCTTTGGCACGAGTGGTTCACGTTTCAGCCTCCTTTAACCATGCAGCTTTTGTTATGCAATCTGGACAGGTATTCACATGTGGAGATAATTCAGCTTCTTGCTGTGGACATAGAGATACAACCCGACCAATTTTCAGGCCACGGCTTGTTGAATCCCTGAAGGGAATTCCTTGCAAACAGGTTGCAGCAGGGCTTAACTTCACAGTCTTCCTCACCAGACAAGGTCATGTTTACACATGTGGAACCAACACACATGGCCAGCTTGGTCATGGTGACACTCAGGACAGGCCAACCCCCAAAATGATTGAAGTCCTTGGCTCCGTTGTTCAGATTGCCTGCAGGGACCAAGCTATATCTTATCCGTAA 846 0.4468 MGDRCRHFSIEELPLHLVLEILCSGRLSAMDLVCLELTSKTFGGSHGLYPFKFKSLVDFAAFQLCASHLTYAKMGLNSQRELYDRCGGNWKRVLRFLQSVEQSSQMVETSSGNMQITTGKYHTLLISNSSVYSCGSGLCGVLGQGSETTQCVAFTRIDFPPLARVVHVSASFNHAAFVMQSGQVFTCGDNSASCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRQGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVLGSVVQIACRDQAISYP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03461 281 SUPERFAMILY RCC1/BLIP-II 112 276 IPR009091 -
Pumo4g03461 281 Gene3D - 52 279 IPR009091 -
Pumo4g03461 281 PANTHER BTK-BINDING PROTEIN-RELATED 113 277 - -
Pumo4g03461 281 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 235 281 IPR000408 -
Pumo4g03461 281 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 182 234 IPR000408 -
Pumo4g03461 281 Pfam Regulator of chromosome condensation (RCC1) repeat 235 273 IPR000408 -
Pumo4g03461 281 Pfam Regulator of chromosome condensation (RCC1) repeat 181 231 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03461 Pumo-Chr4 72550554 72556277 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03461 - - gmx:100782653 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03461 4 72550554 72556277 Pumo4g03461 4 72550554 72556277 ECH