Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03448 ATGGAGGAAGAGCAAGAGCTGAATATCCCCGAAACCATCATCTACGACACTATCAGTCCCCTCGCTCTCTCTGCCGCCGATTCCCCACTCTCCGACCACCTCGAACCCTACTCCGTTTTCCGCAACGAGATTTCCCTCGACACGCCCCAACGCGCCTCGCCCTCCTCCGCCGCCGTCGATTTCTTCTCCCTCGACGTCGCCGCCGATGCCTCCGGCCCCGACCCCTTCCCCGAGCCGCTCGCCGCTGCCGCCCCCGAGCCGAAGACGCCGGCTCCCGCGCCCGAGCCGAAGCTCGAGAGCGGCTGGTTCCGCGGGAATTGCAAATTCAAGAGCCCCATGCTTCAGCTGCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCGCCAACTGCAGAAGAGAAAGCTGCACGAGACACGGCAATAGAAAGTGTGTTTGGAGTTATAAAACATATATGGCCTCACTGCCAGGTGGAGGTGTTTGGGTCTTTCAGGACAGGGCTGTATCTTCCAACTAGTGATGTTGATGTTGTGATTTTGAAATCAGGCTTGCCGAATCCGCAGATTGGCTTGAATGCAATTTCTAAAGCATTGTCACAAAGGGGCATGGCAAAAAAGATTCAGGTCATAGGAAAGGCTCGTGTGCCAATTATTAAATTTGTTGAAAAGAAGAGTGGTGTTGCATTTGATATAAGTTTTGACATAGACAATGGACCCAAAGCAGCTGAGTATATCCAGGAAGCAGTGGTTAAGTGGCCACCACTAAGGCCCTTGTGTTTGATTTTGAAAGTATTTTTGCAGCAAAGAGAACTAAATGAGGTATATTCTGGTGGGATTGGTTCTTATGCCCTCCTTGCCATGCTGATGGCAATGTTGCGGAATCTTTGCCTGAGCCAAGCTTCTGCAGAGCACAATCTGGGAGTTCTTTTGGTGCACTTTTTTGATTTCTATGGACGCAAATTGAACACCTCAGATGTTGGCGTGTCTTGTAATGGGACAGGCACCTTTTTCGTGAAGAGTAGTAAAGGGTTTTTAAACAAAGGACGACCAAGTCTTATTGCCATTGAGGATCCACAGGCACCAGAGAATGACATTGGGAAGAACTCCTTTAATTATTTCCAGGTGTGGCATAACATGTCATTTAGGTGGTCCTCTAAAAAGACTCATTATGACATATAG 1176 0.4889 MEEEQELNIPETIIYDTISPLALSAADSPLSDHLEPYSVFRNEISLDTPQRASPSSAAVDFFSLDVAADASGPDPFPEPLAAAAPEPKTPAPAPEPKLESGWFRGNCKFKSPMLQLHKEIVDFCEFLSPTAEEKAARDTAIESVFGVIKHIWPHCQVEVFGSFRTGLYLPTSDVDVVILKSGLPNPQIGLNAISKALSQRGMAKKIQVIGKARVPIIKFVEKKSGVAFDISFDIDNGPKAAEYIQEAVVKWPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLMAMLRNLCLSQASAEHNLGVLLVHFFDFYGRKLNTSDVGVSCNGTGTFFVKSSKGFLNKGRPSLIAIEDPQAPENDIGKNSFNYFQVWHNMSFRWSSKKTHYDI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03448 391 Pfam Cid1 family poly A polymerase 304 362 IPR002058 -
Pumo4g03448 391 MobiDBLite consensus disorder prediction 78 94 - -
Pumo4g03448 391 PANTHER POLY(A) RNA POLYMERASE 101 374 IPR045862 GO:0043631|GO:1990817
Pumo4g03448 391 FunFam non-canonical poly(A) RNA polymerase PAPD5 129 237 - -
Pumo4g03448 391 Gene3D Beta Polymerase, domain 2 129 237 IPR043519 -
Pumo4g03448 391 Pfam Nucleotidyltransferase domain 148 246 IPR002934 GO:0016779
Pumo4g03448 391 MobiDBLite consensus disorder prediction 74 97 - -
Pumo4g03448 391 CDD NT_PAP_TUTase 136 246 - -
Pumo4g03448 391 SUPERFAMILY PAP/OAS1 substrate-binding domain 252 378 - -
Pumo4g03448 391 Gene3D - 111 378 - -
Pumo4g03448 391 SUPERFAMILY Nucleotidyltransferase 112 264 IPR043519 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03448 K03514 - gmx:100811320 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03448 4 72201581 72208025 Pumo4g03448 4 72201581 72208025 ECH