Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03436 ATGGCTGCTGCCACTAGCTTTGGCACTACATGGTGTCTGAGAAGAGCAGCTCAGGCTTTTGCAATCTCTCATTCTCATATTCTCAGCAGCTATGCGAACGTCTCTTTCCAAAGGAACTTTTGCTCTCATCTCTCCGTTTCTACTTCTTCAGCTCCAGGTGTAAGCCAGACAGTTCAAGCTCTAAAGGGAGAAGTTGACTTGTTACTCAAGGGAGTAGGAGAAAGAAGTGTAACGAAAGAAGTAAAACATATTCTTGAGATGGCTAGACGAGCATCATTAAAGCGAGAGATTCTCCATACAGATTTTCTAACCCCTCCAGTGCTAAAGGAATCTATGCAAGTTTTGGAAAAACTAGCAGACGTGAAAGCAATTGCTCAAGGAGGTTACCCTCAGGCTGAACGTTGTCGGATTTCTGTTGGACATCCAGAAGAACTGATCAGTGATCCAGATATTATTTCAGCATTAAGCATTACAGGAAACTTCCAGTTTGAACCTTGCTCGCATGGTGACTTCCTTGGCTCAATTCTTGGTACAGGAATCGTCAGGGAGAAACTTGGAGATATTATTTTGCAGGGAGAACAGGGTGCTCAGATAATTGTTGTACCTGAACTCGTTGAATTTCTCATGTCAACACTGGTTAAGGTTCGTAATGTTCCTGTATCTTGCACCAAGATTCCATTAATTTCTCTTGATTATGAACCACCAAGAACAAAATCATTCAAAACTATAGAAGCATCACTAAGAGTTGATGCACTAGCTAGTGCTGGATTTAAAGTTTCACGTTCAAAGCTAGTTGACATGATCAGCAATGGTGATGTGCGTGTCAACTGGATCCCTGTTACTACCAAAGGAACCACACTCAAGAGTGGAGATATTGTATCAGTTAGTGGAAAGGGAAGATTAAAGATAGGAGAAATAAACTACACAAAGAAAGGGAAGTTTGCAGTGGAGCTCATTCGGTATTTGTAG 969 0.4159 MAAATSFGTTWCLRRAAQAFAISHSHILSSYANVSFQRNFCSHLSVSTSSAPGVSQTVQALKGEVDLLLKGVGERSVTKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKLADVKAIAQGGYPQAERCRISVGHPEELISDPDIISALSITGNFQFEPCSHGDFLGSILGTGIVREKLGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISLDYEPPRTKSFKTIEASLRVDALASAGFKVSRSKLVDMISNGDVRVNWIPVTTKGTTLKSGDIVSVSGKGRLKIGEINYTKKGKFAVELIRYL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03436 322 Pfam S4 domain 251 293 IPR002942 GO:0003723
Pumo4g03436 322 SUPERFAMILY Alpha-L RNA-binding motif 106 310 - -
Pumo4g03436 322 Gene3D - 241 298 IPR036986 GO:0003723
Pumo4g03436 322 FunFam BnaA05g14690D protein 241 298 - -
Pumo4g03436 322 CDD S4 248 311 - -
Pumo4g03436 322 NCBIfam photosystem II S4 domain protein 77 320 IPR017506 -
Pumo4g03436 322 ProSiteProfiles S4 RNA-binding domain profile. 247 313 - -
Pumo4g03436 322 SMART s4_6 247 307 IPR002942 GO:0003723
Pumo4g03436 322 Gene3D - 149 230 IPR012677 -
Pumo4g03436 322 Gene3D - 75 140 - -
Pumo4g03436 322 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 77 286 - -
Pumo4g03436 322 Pfam Putative RNA-binding domain in YlmH 153 227 IPR040591 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03436 - - gmx:100793767 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03436 4 72057714 72062895 Pumo4g03436 4 72057714 72062895 ECH