Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03419 ATGGGGAACCCCACTCAGAAGTCTCCTGAGGTTGAAAATGATGGTGATCTTAAAGTTCATGTGTTCTCTTCATCATCTGAGTTGCTTGAAAAGCTTCATGAAAAATGGAGTTCAGTGGAGAAACCACCATACCCAGCTATGTATTCTAGTATTTATGGAGGTATCATACTTGATCCAGCAATGATGGTAATCCCCATCGATGATCACATGGTACACAGAGGGCATGGTGTGTTTGATACAGCTATTGTTCTAGAGGGATACCTCTATGAATTGGATGTTCACCTTGACAGAATCCTAAGGTCAGCCTCCAAAGCAAAGATATCCTCTCCCTTTTCTCGGTCAGCACTTCGCAGCATTCTAATACAACTAACTGCAGCATCAAAATGCAAGAAGGGAACCCTAAGATTCTGGCTGAGTGCAGGTCCTGGGGATTTCTTGCTATCATCAGCAGGATGTCCAACATCTGCATTCTATGCAGTAGTCATTGACTATGATTTTTCCCAATGCAAAGAGGGAGTTACAGTGATTACTTCCAACATACCAATGAAGCCTCCTCTATTTGCCACAGCTAAAAATGTGAATTATCTTCCAAATGTCCTTTCAGTAATGGAAGCTGAAGAGAAAGGAGCATGTTCTTCTATATGGGTTGATGAGGCAGGTTATATTGCTGAAGGTCCAAATGTGAATGTTGCTTTTATAACTCAAGACAAAGAACTTGTCATGCCTCCTTTTGATAACATCCTAGATGGTTGCACTGCAAAAAGGCTTCTTGAACTGGCACCCAAGTTGGTTGATCAAGGGCTTCTGAAAGGTGTGGCAACCAAAAGACTAACTGTGGAGGAAGCGAAAACTGCTGCTGAAATGATGTATGTAGGAAGCACACTTCCTCTGTTGCCTATCATCGTGTGGGATGATCAACCCATTGGCAATGGAAGGGTTGGAGAATTAACAATGTTACTTTCGGATTTGCTGTGGGATGATATGGTAGCTGGCCCCGACACACAGAGAATACCTGTTCCTTATGATCAGTGA 1032 0.4273 MGNPTQKSPEVENDGDLKVHVFSSSSELLEKLHEKWSSVEKPPYPAMYSSIYGGIILDPAMMVIPIDDHMVHRGHGVFDTAIVLEGYLYELDVHLDRILRSASKAKISSPFSRSALRSILIQLTAASKCKKGTLRFWLSAGPGDFLLSSAGCPTSAFYAVVIDYDFSQCKEGVTVITSNIPMKPPLFATAKNVNYLPNVLSVMEAEEKGACSSIWVDEAGYIAEGPNVNVAFITQDKELVMPPFDNILDGCTAKRLLELAPKLVDQGLLKGVATKRLTVEEAKTAAEMMYVGSTLPLLPIIVWDDQPIGNGRVGELTMLLSDLLWDDMVAGPDTQRIPVPYDQ 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03419 343 CDD ADCL_like 68 324 IPR017824 GO:0008696|GO:0030170|GO:0046656
Pumo4g03419 343 FunFam D-alanine aminotransferase 164 331 - -
Pumo4g03419 343 PANTHER AMINO-ACID AMINOTRANSFERASE 18 332 - -
Pumo4g03419 343 Gene3D - 165 332 IPR043132 -
Pumo4g03419 343 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 51 328 IPR036038 GO:0003824
Pumo4g03419 343 Pfam Amino-transferase class IV 76 300 IPR001544 GO:0003824
Pumo4g03419 343 Gene3D - 17 164 IPR043131 -
Pumo4g03419 343 FunFam D-amino-acid transaminase, chloroplastic 24 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03419 Pumo-Chr4 71784056 71786846 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03419 K18482 - gmx:100798871 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03419 4 71784056 71786846 Pumo4g03419 4 71784056 71786846 ECH