Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03406 ATGGCGTCAACTTCACATGGCGGTGGTGGTGGCAGCGGCGGCGCCGCCGCACGATTGAGGAACTCTGCTTCCACCTTCTGCACCGACTCTCAGCCTCTCATTGCCGATATCCGAAAAACCGTGCTTTTGATGAAGGACATCGCAGTTCAATTGGAGAAAGACAACCTCCCTGACAAGGTGAAGGAGCTTGAAGACGCGGTTATTGAGTTAGTGGGGCTATCTGAACTCAGTGTGCAATTTTCATCAGCGGTTCAAGCTTTTGCCAACTCATACCAGCCTAGAGAAGAGTTCACTAATTTTAACAAGTTGTTTGAGGATGAACTTTCCAGGTTTAAGGCCAACCAATCTTCAAATCTTCCTAAAAATCCTTTAATACGCCAATTTAAGGAAGCTGTGTGGAATGTTCATCATGCGGGACAGCCAATGCCAGGTGAAGAGCAGGAAGACATTGTAATGACCAGTACCCAGTCCAATATTTTGAATATTACCTGTCCATTGAGTGGAAAACCTGTCACTGAGCTTGCGGAACCAGTTCGCAGCATGGAATGTAGGCACATTTATGAAAAGAAAGTAATAATGCAATATTTGAAGTCAAAGCAGCACCGTGGTCAATGCCCAATATCAGGTTGCCCAAAGATATTGCAGGCAGATAAGCTGGTGCAAGATCCGTTGTTGATGATTGAGATTGAGGAAATGCGCAAAATGAATAAAGAAACTGACGTAGAAGATTATACCATGCTTAATGAAGACTAG 753 0.4462 MASTSHGGGGGSGGAAARLRNSASTFCTDSQPLIADIRKTVLLMKDIAVQLEKDNLPDKVKELEDAVIELVGLSELSVQFSSAVQAFANSYQPREEFTNFNKLFEDELSRFKANQSSNLPKNPLIRQFKEAVWNVHHAGQPMPGEEQEDIVMTSTQSNILNITCPLSGKPVTELAEPVRSMECRHIYEKKVIMQYLKSKQHRGQCPISGCPKILQADKLVQDPLLMIEIEEMRKMNKETDVEDYTMLNED 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03406 250 PANTHER UNCHARACTERIZED 15 240 IPR026846 GO:0000724|GO:0019789|GO:0030915
Pumo4g03406 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 156 245 IPR013083 -
Pumo4g03406 250 Pfam Zinc-finger of the MIZ type in Nse subunit 149 210 IPR004181 GO:0008270
Pumo4g03406 250 CDD SPL-RING_NSE2 162 231 IPR004181 GO:0008270
Pumo4g03406 250 ProSiteProfiles Zinc finger SP-RING-type profile. 146 234 IPR004181 GO:0008270
Pumo4g03406 250 SUPERFAMILY RING/U-box 163 211 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03406 K22756 - gmx:100804379 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03406 4 71660092 71664175 Pumo4g03406 4 71660092 71664175 ECH