Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03353 ATGAGACTTAGACCCAAACGCATCAGATCCAAGTGTCGAACCCTAGCCGTGAAGTGCAAACCCCTCGTTGTCGGTGCACACAATTTGCAGTTTTGCACTGTTGTTGTGTTTTCTGAGTTACGGCTTCGAAGGCACTTGACCTCAGAGAGCGTCGTTTGGTTGGAGGAGGAGGGATCAGCCGCGAACCAAGGATCTTCAGTTCCGATCTTGACCCTCAGTATGGCAAAGGGAGCAAGCTCAAAACTGAACATTGCAATAATTCACCCAGATCTTGGCATAGGTGGAGCTGAGAGATTAATTGTGGATGTTGTTGTTGAGCTTGCATCCCAAGGCTATAAAGTTCATGTTTTTACTACACATCATGATAAAAATATATGCTTTGGGGAAACTGTTGCTGGTACTTTTCCAGTTACTGTGTATGGTTCCTTTCTTCCCCGACTTGTATTCTACCGTCTTCATGCATTGTGTGCATACCATCGGTGCCTATTTGTTGCTTTCTGTGTACTTTTCATGTGGCATTCATTTGATGTTATACTGGCAGATTAA 546 0.4432 MRLRPKRIRSKCRTLAVKCKPLVVGAHNLQFCTVVVFSELRLRRHLTSESVVWLEEEGSAANQGSSVPILTLSMAKGASSKLNIAIIHPDLGIGGAERLIVDVVVELASQGYKVHVFTTHHDKNICFGETVAGTFPVTVYGSFLPRLVFYRLHALCAYHRCLFVAFCVLFMWHSFDVILAD 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03353 181 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 83 180 - -
Pumo4g03353 181 Gene3D Glycogen Phosphorylase B; 79 180 - -
Pumo4g03353 181 PANTHER ALPHA-1,3/1,6-MANNOSYLTRANSFERASE ALG2 78 181 IPR027054 GO:0004378|GO:0006486
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03353 Pumo-Chr4 70884742 70892451 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03353 74 181 Glycosyltransferase AT1G78800 75.926 2.05e-55 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03353 K03843 - gmx:100809168 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03353 4 70884742 70892451 Pumo4g03353 4 70884742 70892451 ECH