Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03344 ATGGCGCAGACCCAAACCCTATCCTTCATTCACGAGATCGAATCTCTCGTCTCCGATAAACTTCAAGTGGTTTCGTACAAATGGCTGAGTCGCAATTATATGGTATCGTCCGATGAAGCAAAGAGGTTGCTTCAGGAGTTTGTGCAAAAACATGAGGGTGGGTTGGAGGTGGTGTATGCTTTGTCTGGCTGGTTAAAGAGCAATCATCCTAGTTACCACGTAAGGCTTGTTACCGGGCCAAAGCTTGCAGAAGCACAACAAGAATTTGATGGGGATTGCTCAGTTCAGATATACAGTGTGCAAGCTAGCATTCCAAAGGATCCAGCTGTGCTTTGGAATGCTGAATTCATTCAAGCAGAGGAGCTCTTCAAGAAACCTTCCTCAGTTGACAATTGTTTGAGGGATAATAGGTTCTGTGGGATCTCTAATTCTTTTGTACGACGGAATGTGGATGGCCCAACAGTAGTTTCTGCAGCTGCACAATCAAAATCTGTAGGTGAGGGACCAACAAAGAGTAACATAGTTCACCAACCTCCTAAAAATATAGCACGTGATTCTATTGACAAAGTTGATGCCAAGCCACAGAGTGTAGTAAAAGAAGTCAAGAGTGAAAGCAATGGTATAGGGAATACTGTAGTTCATGATAACATCAACAAACCTACTGCAGACAAAGAAAAGGCCCCTCCCTTACCCACAGGCAAAAAGAAAGTACAAGCTGATAAAAGTGGTTCTGTTAATGGAGGTTCATTAGCAAGCCTTTGGGGCCGTGCATCCGCAAAACCCAAGCCTTGCTCCTCATCAGCAGAAAATAATAACAAAATTTCAAATCCTCCTGTATCTACTGAAGCTGGACAAACTGCTGCTCATGAAGCAGAAGAGTGTGACAGTGGTAATGATGATAATCAAGATGTCTCCTTGAGAAGGTCATCCAATAGGAAAAGAAGGGTTGTCTTTGATTTCTCAGATGAAGATGAAGATGATGTTGTCAATTTATCATCACCTGATCTCCCAAATAAACAATCATCTCAAGATTCTAGACAAAATGACAAAAAAACATCAGAGAAAACCACTCTGAATTTTGATTCACAGGAAGAAAATAAATCAAGGGTTAAGGAAGAGAGAGCAACTGACCAAAAGGCTCACCTATCACCGAGAGAAAATGTGTCCACTATCAGCAAGTGCACCAATACTGGGAAATCATCTTCTGAAAAGTTGCATAGTGGTGCTCCTGAAGTTCGTGTAAATAAGGATAGTGTAAACAATGCCCCTCCATGTTCACCTAAGAGGAGAAAAGTGATGAAGACCAGGATTGATGAACGAGGGAGAGAAGTAACTGAAGTAGTCTGGGAGGGGGAGGAGACAGAAGAGAAGAAACCTGATAAGGTTACAACAAAGAAATCTGACACTAATGCATCTACCAAAGCTATCAATAGTGCTCCAGCAACTAAGAAGCCACCAGTCAATTCAAATGCCAATAGTGGAAAAGGTGGAAACAAGAAAGCAGGAAACTCAAAGGATCCCAAACAGGGCAATATACTTTCATTTTTCAAGAGAGTTTGA 1560 0.4186 MAQTQTLSFIHEIESLVSDKLQVVSYKWLSRNYMVSSDEAKRLLQEFVQKHEGGLEVVYALSGWLKSNHPSYHVRLVTGPKLAEAQQEFDGDCSVQIYSVQASIPKDPAVLWNAEFIQAEELFKKPSSVDNCLRDNRFCGISNSFVRRNVDGPTVVSAAAQSKSVGEGPTKSNIVHQPPKNIARDSIDKVDAKPQSVVKEVKSESNGIGNTVVHDNINKPTADKEKAPPLPTGKKKVQADKSGSVNGGSLASLWGRASAKPKPCSSSAENNNKISNPPVSTEAGQTAAHEAEECDSGNDDNQDVSLRRSSNRKRRVVFDFSDEDEDDVVNLSSPDLPNKQSSQDSRQNDKKTSEKTTLNFDSQEENKSRVKEERATDQKAHLSPRENVSTISKCTNTGKSSSEKLHSGAPEVRVNKDSVNNAPPCSPKRRKVMKTRIDERGREVTEVVWEGEETEEKKPDKVTTKKSDTNASTKAINSAPATKKPPVNSNANSGKGGNKKAGNSKDPKQGNILSFFKRV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03344 519 MobiDBLite consensus disorder prediction 382 404 - -
Pumo4g03344 519 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 6 146 IPR041913 -
Pumo4g03344 519 MobiDBLite consensus disorder prediction 191 519 - -
Pumo4g03344 519 MobiDBLite consensus disorder prediction 199 217 - -
Pumo4g03344 519 MobiDBLite consensus disorder prediction 431 467 - -
Pumo4g03344 519 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 518 IPR019038 GO:0005634|GO:0006260|GO:0043625
Pumo4g03344 519 FunFam DNA polymerase delta subunit 7 149 - -
Pumo4g03344 519 MobiDBLite consensus disorder prediction 468 510 - -
Pumo4g03344 519 Pfam DNA polymerase subunit Cdc27 23 518 IPR019038 GO:0005634|GO:0006260|GO:0043625
Pumo4g03344 519 MobiDBLite consensus disorder prediction 344 381 - -
Pumo4g03344 519 MobiDBLite consensus disorder prediction 288 321 - -
Pumo4g03344 519 MobiDBLite consensus disorder prediction 263 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03344 Pumo-Chr4 70730285 70735454 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03344 K03504 - gmx:100812372 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03344 4 70730285 70735454 Pumo4g03344 4 70730285 70735454 ECH