Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03343 ATGTCAAGCGACGCCGTTTGGGTCCTCTTCTTCCTCTTGGCCTTCTCCCATTGCGTTCCCTCCTTCAGGGCCCACTCGGCGATCCTCCTCCCGGGTCAACTCGGCCGTGACTCGCCATCTAGTTGCCCCGCCCCCGATCCCAACCTCTACTACAAACCAGTAATCGGAATCGTCAGCCACCCCGGCGACGGTGCCTCCGGCCGCCTCAGCAACTCCACCGGCGCCTCCTACATCGCCGCCTCCTACGTCAAATTCGTCGAGGCCGCCGGCGCCCGAGTCGTTCCCCTCATCTATAACGAGCCGCCCGAGAAGCTTCTCAAGAAGCTCGAATTCGTAAATGGGGTTCTCTTCACTGGTGGATGGGCTAAAAGTGGTTTATATTTTGAAACTGTTACAAAAATATTTAAGAAAATTTTAGAGAAAAATGATGCTGGAGATTATTTCCCATTATATGCCACCTGCTTAGGTTTTGAACTCATAACGATGATCATAAGCCAGGACAATAATATTCTTGAAGAGTTTAGTGCATCAAATCAGGCAAGTACTCTTCAATTTGTGGAGAATGCAAATATTGAAGAAAGTGTCTTTCAAAGATTTCCTCCAGAGTTGTTAAGGAAGATGAGTACAGATTGTCTTGTCATGCAAAACCATCGTTATGGCATATCCCCTGGAAAGCTTCTGGATAATCCCAAGTTATCTAGTTTTTTTGAGATCTTGACAACTTGCACGGATGAAGATGATAAGGTTTATGTTTCCACTGTACGTTCTCGAAACTATCCTGTGACTGGCTTCCAATGGCATCCAGAGAAAAATGCCTTTGAATGGGGTTCACCAAGAATTCCACACACGGAGGATGCCATTCAGATAACTCAGTATGTTGCAAATTTTTTGGTCAGTGAAGCTAGGAAATCCTTAAACAGACCAGTTGCTCAAGAATTGCTAGACAATCTCATTTACAATTACAGTCCCACTTATTGTGGGAAGGCTGGGAGAGGATTTGATGAAGTTTATATATTTGCACAAGCCTGA 1029 0.4577 MSSDAVWVLFFLLAFSHCVPSFRAHSAILLPGQLGRDSPSSCPAPDPNLYYKPVIGIVSHPGDGASGRLSNSTGASYIAASYVKFVEAAGARVVPLIYNEPPEKLLKKLEFVNGVLFTGGWAKSGLYFETVTKIFKKILEKNDAGDYFPLYATCLGFELITMIISQDNNILEEFSASNQASTLQFVENANIEESVFQRFPPELLRKMSTDCLVMQNHRYGISPGKLLDNPKLSSFFEILTTCTDEDDKVYVSTVRSRNYPVTGFQWHPEKNAFEWGSPRIPHTEDAIQITQYVANFLVSEARKSLNRPVAQELLDNLIYNYSPTYCGKAGRGFDEVYIFAQA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03343 342 SUPERFAMILY Class I glutamine amidotransferase-like 73 327 IPR029062 -
Pumo4g03343 342 Coils Coil 338 342 - -
Pumo4g03343 342 FunFam Folate gamma-glutamyl hydrolase 49 340 - -
Pumo4g03343 342 Pfam Peptidase C26 53 269 IPR011697 GO:0016787
Pumo4g03343 342 Gene3D - 50 340 IPR029062 -
Pumo4g03343 342 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 9 339 IPR015527 GO:0008242
Pumo4g03343 342 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 68 306 - -
Pumo4g03343 342 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 44 340 IPR015527 GO:0008242
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03343 Pumo-Chr4 70665065 70671718 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03343 K01307 - gmx:100796947 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03343 4 70665065 70671718 Pumo4g03343 4 70665065 70671718 ECH