Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03255 ATGCCTGAGGCTCCTAGAGACTCCTCCGTCACAGACTATGTTCTTGCTGAGAAGAACAAGAAGATTCTGGACTTCATAGAGGATGTGACTAACAACGCAGATGAAGTCCAGAAGAAGGTTCTCTCTGAAATTCTGTCCCGCAATGCAAACGTTGAGTACCTGCGGCGACATGGTCTCAATGGCCAAACCGACCGTGACTCCTTCAAGAGGCTTCTCCCTGTCATTACCTACGAGGATATCCAACCTGACATTAACCGCATCGCCAATGGTGACGAGTCTCCGATCCTCACCTCAAAACCCATCACAGAATTTCTCACCAGCTCTGGGACATCAGGGGGTGAGAGAAAGCTGATGCCAACAATTGAGGATGAGCTAGGGAGGAGGTGCATGTTGTACAGCCTCTTGATGCCAATAATGAGCCAATTTGTCCCCGACCTAGAAAAGGGCAAAGGAATGTACCTAATGTTTATAAAATGCGAGTCCAAAACACCTGGAGGCATAGTGGCTCGCCCAGTCCTCACAAGCTATTACAAAAGCCCCTACTTTAAGGACAGACCCTATGACCCATACACAAACTACACAAGCCCAAATGAGACAGTCCTTTGCCCCGATTCCTACCAAAGCATGTACTCCCAACTCCTCTGTGGCCTTTGCCAAAACAAAGAGGTTTTTAGAGTAGGTGCCATCTTTGCCTCTGGCTTCATTCCGTGCCATTAG 717 0.484 MPEAPRDSSVTDYVLAEKNKKILDFIEDVTNNADEVQKKVLSEILSRNANVEYLRRHGLNGQTDRDSFKRLLPVITYEDIQPDINRIANGDESPILTSKPITEFLTSSGTSGGERKLMPTIEDELGRRCMLYSLLMPIMSQFVPDLEKGKGMYLMFIKCESKTPGGIVARPVLTSYYKSPYFKDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVFRVGAIFASGFIPCH 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03255 238 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 19 235 IPR004993 -
Pumo4g03255 238 Pfam GH3 auxin-responsive promoter 26 234 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03255 Pumo-Chr4 67312708 67314411 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03255 15 235 EF-hand Containing Proteins AT1G23160 48.416 1.24e-67 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03255 K14487 - gmx:100797120 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03255 4 67312708 67314411 Pumo4g03255 4 67312708 67314411 ECH