Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03224 ATGGATTATGAACCTCCATTTTTAGAGTTCTACAAGCCCCTCCTTCTACAAAGCTCCCACGGTGTTGATGTTGGTATGAGTGGTGGTGGCATAAGAAACTACAAATCCGAGTGGTGTGAGCTTCCTCTAATTGATCTAAGCCGGTTGAGTCTCGAGAGGGAGGAGTGCATGAGAGAAATCAGTGGAGCCGCAAGAACGTGGGGTTTCTTCCAGGTTGTGAATCATGGGGTTTCACAAGAGCTGCTGCAGAGTCTGCGGTATGAGCAAGTGGAAGTGTTCCGCACCCCTTTTGCTAAAAAGTCCCGAGACAATTTCCTGAACTTGCCTGCCAGAAGTTACAGGTGGGGCAACCCATCTGCCACAAACTTGAGTCAAATTTCATGGTCAGAAGCCTTCCACATGTTTCTTCCAGATATAGCTAGGATGGACCAGCACCAAAGTTTGAGATCAACTATTGAAGCTTTTGCATCTGTAATTGCCCCTCTGGCAGAAAGCCTAGTGCAAATTCTAGCTCAGAAACTGAACATCAAATTCAGCTATTTCCAAGAGAATTGTTCAGCAAACACTAGCTTTCTTCGGCTGAACAGATATCCACCATGTCCATTCCATTCAAGGGTGTTTGGCCTCTTACCTCACACTGACTCTAGTTTCCTCACTATAGTTAACCAGGACCTGATTGGAGGGTTGCAAATAATGAAAGATGGAAATTGGGTTGGTGTGAAACCTAACCCCCAAGCTCTGGTTGTTAATATTGGTGATTTATTCCAGGCACTAAGCAATGGCATTTACATAAGTGCTAAGCACAGGGTGGTGGGAGCTGAGAAGGTAGAGAGGTTCTCTGTGGCATATTTCTACAACCCTTCCAAAGATGCATTGATAGAGAGCCACATCATGCCACCAATGTACAGGAAGTTTACTTTTGGAGAGTACCGAGGGCAGATAGAGAAAGATGTTAAGGAAACAGGTGATAAAGTGGGGCTCTCTAGGTTTCTCTTGTAG 999 0.4525 MDYEPPFLEFYKPLLLQSSHGVDVGMSGGGIRNYKSEWCELPLIDLSRLSLEREECMREISGAARTWGFFQVVNHGVSQELLQSLRYEQVEVFRTPFAKKSRDNFLNLPARSYRWGNPSATNLSQISWSEAFHMFLPDIARMDQHQSLRSTIEAFASVIAPLAESLVQILAQKLNIKFSYFQENCSANTSFLRLNRYPPCPFHSRVFGLLPHTDSSFLTIVNQDLIGGLQIMKDGNWVGVKPNPQALVVNIGDLFQALSNGIYISAKHRVVGAEKVERFSVAYFYNPSKDALIESHIMPPMYRKFTFGEYRGQIEKDVKETGDKVGLSRFLL 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03224 332 Gene3D - 39 327 IPR027443 -
Pumo4g03224 332 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 41 311 - -
Pumo4g03224 332 SUPERFAMILY Clavaminate synthase-like 34 314 - -
Pumo4g03224 332 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 188 287 IPR005123 -
Pumo4g03224 332 Pfam 2OG-Fe(II) oxygenase superfamily 190 287 IPR044861 -
Pumo4g03224 332 FunFam Gibberellin 2-beta-dioxygenase 8 39 324 - -
Pumo4g03224 332 Pfam non-haem dioxygenase in morphine synthesis N-terminal 41 135 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03224 Pumo-Chr4 66527776 66532004 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g03224 40 310 Glycosyltransferase AT5G59530 29.897 1.80e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03224 K04125 - gmx:100805270 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03224 4 66527776 66532004 Pumo4g03224 4 66527776 66532004 ECH