Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03214 ATGCCTGCATTTACTCCAGAAGGTTATCTAGATATAGGCAAGACTCTAAGCCGAATCTACCGTGGGGGAGTCCATCCCTCAATTAAGGGAGAAGTTTGGGAATTTCTACTTGGATGCTATGATCCCAAGAGCACATTTGAGGAAAGAGATCAGATAAGACAACGTCGAAGAATGCAATATGCTACATGGAAAGAAGAATGCCGCCAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTGTCACAGCACCTGTTATTACTGAAGATGGTCAGCCAATTCAAGATCCATTGGTTCTGAAAGAAACAAATCTGGCCAATGGATTGGCTGTACATCCTCAAGATAATAATGGTCCTTCAAGTATGGATGCTGCAAATAATTTAGAAAAGGTGACAGACAAGACAGTAGTCCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGATGTGGTTCGCACCGATAGGACATTAGTTTTTTATGAGAAGCAAGAAAACTTGTCGAAACTATGGGATATTCTTGCTGTTTATGCTTGGATAGATAAGGATGTTGGCTATGGTCAAGGAATGTGTGACCTATGCTCCCCTATGATAATTCTTCTTGATGATGAAGCAGATGCATTTTGGTGCTTTGAGCGTTTGATGCGCAGACTTCGAGGCAATTTTAGATGCACTGAGAGCTCTGTTGGGGTGGCGGCTCAACTAAGTAATTTGGCTTCAGTTACTCAAGTAATTGATCCAAAACTTCATAAACATTTAGAGCATCTTGGTGGAGGTGACTATCTGTTCGCTTTTCGAATGCTAATGGTTTTGTTTCGTCGAGAATTCTCTTTTTGTGATTCATTGTACCTTTGGGAGATGATGTGGGCTCTAGAATATGATCCTGACTTGTTCTTGATGTATGAAATGCCTCAATCAGCTTCTGAAAAAGCTGAGGGCTCAAAAGGGAAAACAAAGTCAATACGTCAATGTGGAAAGTATGAGAGAGAAATTATGAAGAATGGAGCAAAGAATGCTGAAGCTCCTCTTCCTATGTCTGTTTTCCTTGTTGCTAGCGTATTGAAAGATAAAAGTGCAAAACTACTCCAAGAAGCACGAGGCTTGGATGATGTTGTCAAGATTTTGAATGACACAACTGGTAATATAGATGCCAAAAAAGCTTGCAGTGGGGCTATGAAACTTCACAAGAAATATTTGAAAAAGGCCAAGAAACCCTAG 1209 0.4036 MPAFTPEGYLDIGKTLSRIYRGGVHPSIKGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSGRFVTAPVITEDGQPIQDPLVLKETNLANGLAVHPQDNNGPSSMDAANNLEKVTDKTVVQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKDVGYGQGMCDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTESSVGVAAQLSNLASVTQVIDPKLHKHLEHLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEMPQSASEKAEGSKGKTKSIRQCGKYEREIMKNGAKNAEAPLPMSVFLVASVLKDKSAKLLQEARGLDDVVKILNDTTGNIDAKKACSGAMKLHKKYLKKAKKP 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03214 402 FunFam TBC1 domain family member 15-like 121 219 - -
Pumo4g03214 402 SMART tbc_4 20 312 IPR000195 -
Pumo4g03214 402 Gene3D - 225 402 - -
Pumo4g03214 402 ProSiteProfiles TBC/rab GAP domain profile. 23 289 IPR000195 -
Pumo4g03214 402 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 15 373 - -
Pumo4g03214 402 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 227 395 IPR035969 -
Pumo4g03214 402 Pfam Rab-GTPase-TBC domain 117 287 IPR000195 -
Pumo4g03214 402 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 120 219 - -
Pumo4g03214 402 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 12 249 IPR035969 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03214 Pumo-Chr4 66224839 66232796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03214 - - gmx:100805808 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03214 4 66224839 66232796 Pumo4g03214 4 66224839 66232796 ECH