Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03212 ATGGTTGCAGTCGCGGTTTTTTCTCGTTCCTTGATATTGTGGAAAATTGTGGATAAATGTGGCCGATATGCGGACACACCAGAAACCTTGACGTTGCAGCTGAAAACATTGTTGCAGACTATATGTGTTTACCGCTTGTCTTCTGTCTACAGAAAAATCCCAAGAGATTTAACTGAGGCATCATTATCCGGAGCTGGGTTATCCATAATAGCAGCTCTCGCCATGATATTTTTATTTGGAATGGAGCTTAATAGTTATTTGACTGTCAGCACCTCTACATCAGTGATTGTTGACAAGAGTTCTGATGGGGACTATTTACGTATAGATTTCAATATGAGTTTTCCTGCCCTCTCCTGTGAGTTTGCAGCAGTTGATGTGAGTGACGTGCTGGGCACAAACAGGCTGAATCTAACAAAAACAGTTCGCAAGTTTCCTATTGATTCAAATTTAAGACCTACTGGTGCTGAATTCCATTCAGAACCATATGCTAACAGCATTAAGCACGATAATGAAGTACATGAAGAGTCCATTGAAGGTTCTGTTGTACTCACAACACAGAATTTTGATAAATATTCTCATCAGTTTCAAATTTTAGTTGTTAATTTTTATGCTCCTTGGTGTTACTGGAGTCAACGCTTGAAACCTTCATGGGAGAAGGCAGCTAAAATAATTAAAGAGAGATATGATCCAGAAATGGATGGCCGTATTATTTTGGGGAGGGTAGATTGCACTGAAGAAGGAGACTTGTGCCGGAGCCATCATATACAAGGGTATCCTTCAATCCGTATCTTTCGTAAAGGAAGTGATGTTAGAAGTGACCATGGACATCATGATCATGAGTCCTATTATGGAGATCGTGACACAGATAGCCTAGTCAAGACAATGGATAATTTAGTGGCATCTCTCCCTTCAGAATCTCAGAAGTTACCTTTGGAGGATAAATCCAATGTTGCAACAAATACAAAAAGACCAGCACCATCAACAGGGGGATGTAGAATTGACGGATATGTGCGTGTCAAGAAGGTTCCTGGAAGCTTGATCATCTCAGCTAGATCCAATGCCCATTCCTTTGATGCTTCTCAAATGAACATGTCACATGTCATAAACCATTTATCTTTTGGAAGGAAAGTATCACCTAGGGTCATGAGTGATGTGAAGCGCTTGATACCTTATGTTGGTAGCAGCCATGACAGGCTGAATGGTCGGTCATTTATCAATACACATGATTTAGGAGCAAATGTTACTATGGAGCATTACCTTCAGATAGTTAAAACAGAGGTGATAACTAGAAAGGATTATAAATTAGTTGAGGAGTATGAGTACACAGCGCACAGCAGTGTGGCACAGAGTTTACACATTCCTGTTGCTAAGTTCCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACGGAAAACTCGAAGTCCTTTTCTCACTTTATTACAAATGTCTGTGCTATTATTGGGGGTGTTTTCACGGTTTGTATCTCATATTGTGGTTCAGTACTTGTATTGTCCTCTATTTCTATGGTTGACGACTCTTCTCTGTGGTTTCAGGTTGCTGGAATTTTGGACGCGATTTTGCACAACACTATTAGACTAATGAAAAAAGTTGAGCTTGGCAAAAATTTTTGA 1632 0.4007 MVAVAVFSRSLILWKIVDKCGRYADTPETLTLQLKTLLQTICVYRLSSVYRKIPRDLTEASLSGAGLSIIAALAMIFLFGMELNSYLTVSTSTSVIVDKSSDGDYLRIDFNMSFPALSCEFAAVDVSDVLGTNRLNLTKTVRKFPIDSNLRPTGAEFHSEPYANSIKHDNEVHEESIEGSVVLTTQNFDKYSHQFQILVVNFYAPWCYWSQRLKPSWEKAAKIIKERYDPEMDGRIILGRVDCTEEGDLCRSHHIQGYPSIRIFRKGSDVRSDHGHHDHESYYGDRDTDSLVKTMDNLVASLPSESQKLPLEDKSNVATNTKRPAPSTGGCRIDGYVRVKKVPGSLIISARSNAHSFDASQMNMSHVINHLSFGRKVSPRVMSDVKRLIPYVGSSHDRLNGRSFINTHDLGANVTMEHYLQIVKTEVITRKDYKLVEEYEYTAHSSVAQSLHIPVAKFHLELSPMQVLITENSKSFSHFITNVCAIIGGVFTVCISYCGSVLVLSSISMVDDSSLWFQVAGILDAILHNTIRLMKKVELGKNF 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03212 543 FunFam Protein disulfide-isomerase 5-4 168 324 - -
Pumo4g03212 543 Pfam Endoplasmic reticulum vesicle transporter 324 494 IPR012936 -
Pumo4g03212 543 ProSiteProfiles Thioredoxin domain profile. 161 300 IPR013766 -
Pumo4g03212 543 CDD PDI_a_family 181 295 - -
Pumo4g03212 543 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 49 134 IPR039542 -
Pumo4g03212 543 MobiDBLite consensus disorder prediction 303 330 - -
Pumo4g03212 543 SUPERFAMILY Thioredoxin-like 181 298 IPR036249 -
Pumo4g03212 543 Gene3D Glutaredoxin 165 324 - -
Pumo4g03212 543 Pfam Thioredoxin 181 279 IPR013766 -
Pumo4g03212 543 MobiDBLite consensus disorder prediction 303 326 - -
Pumo4g03212 543 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 49 542 IPR045888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03212 Pumo-Chr4 66209655 66216410 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03212 - - gmx:100809522 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03212 4 66209655 66216410 Pumo4g03212 4 66209655 66216410 ECH