Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g03175 ATGGGCGGTTTCTTGTTACCATTGCCAACTCTCTTGTTGTGTCTCTTTGTTGTGTTAATTTATTATTCCCTCAAAACAAAGGCTGAGGAATTTGATTTTGATGACTCCTTCTTGAATGCAAACTTTTCCAGTGGCAGAAAACTTGCAGGAAGATGCAACTTGTTTCGTGGGAAATGGGTGTATGACCCTTCATACCCTCTCTATGACCCCTCTACATGTCCCTTCATAGATCCACAATTCAACTGCCAAAAGTACGGTAGACCTGACAAACTGTATCAGAAATATAGATGGCAACCATTCTCTTGTCCTTTACCAAGGTTCAACGCATTTGACTTCCTGGCCAAGTATAGGGGCAAGAAGATTATGTTTGTCGGTGACTCCTTGAGCTTGAACCAGTTCAACTCTCTGGCTTGTATGATTCACTCTTGGGTGCCTAACACTAGAACCTCTTTCATAAAGCAAGATGCTCTCTCCAAAATCACATTTGAGGACTATGGCCTTCAGTTATTTCTGTACCGCACACCATACTTGGTAGACCTTGACCAGTGA 549 0.4244 MGGFLLPLPTLLLCLFVVLIYYSLKTKAEEFDFDDSFLNANFSSGRKLAGRCNLFRGKWVYDPSYPLYDPSTCPFIDPQFNCQKYGRPDKLYQKYRWQPFSCPLPRFNAFDFLAKYRGKKIMFVGDSLSLNQFNSLACMIHSWVPNTRTSFIKQDALSKITFEDYGLQLFLYRTPYLVDLDQ 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g03175 182 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 104 181 IPR026057 GO:0016740
Pumo4g03175 182 Pfam PMR5 N terminal Domain 51 102 IPR025846 -
Pumo4g03175 182 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 179 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g03175 Pumo-Chr4 65281160 65283980 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g03175 - - gmx:100813837 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g03175 4 65281160 65283980 Pumo4g03175 4 65281160 65283980 ECH
Pumo4g03175 4 65281160 65283980 Pumo11g01003 11 37735943 37741832 PCT