Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02235 ATGTTGCAAGATATGTGGAATGCTCCCCCAGGCTTCAGACCCTCCAAATCAGCCCCATCTTCTCCGGCAAAGCCTCTTGGGGTTCCCAGAACGCGCTCTGAGTCCTTCCACGTTGCTCACAAGGTTCCAGTTGGTGACAGTCCTTATGTCAGAGCCAAGAACGTTCAGTTGGTGGATAAGGACCCGGAGAGAGCGATTCCGCTGTTTTGGGCAGCCATTAATGCGGGAGATAGAGTGGACAGTGCTTTGAAAGATATGGCTATTGTCATGAAGCAGCAAAATCGGGCTGAAGAAGCCATTGAGGCCATTAAATCGCTTCGAAGTAGATGTTCAGATCAAGCCCAAGAATCTCTTGATAATATCCTCTTGGATCTTTACAAGAGGTGTGGGAGACTTGATGACCAAATTGCTCTATTGAAGCGCAAGTTGTACTTGATTCAACAAGGGTTGGCTTTCAATGGCAAGCGCACAAAGACTGCCAGATCTCAAGGGAAGAAGTTTCAAGTCTCTGTGGAGCAAGAAGCCACTAGATTGCTGGGAAACTTGGGATGGGCACTGATGCAGCAGAACAACTACATTGAAGCAGAAGAGGCCTATCGCCGCGCACTTTCGATAGCTCCAGACAACAACAAAATGTGCAATCTGGGCATATGCTTGATGAAGCAAGGGAGAATTGGTGAGGCAAAGGAAACACTGTACCGTGTAAAGCCTGCAGTAATAGATGGCCCTAGAGGCTCAGATTCTCACCTGAAAGCCTATGAAAGGGCACAGCAAATGCTGAAGGACCTTGAGTCTGAGATGATGAACAAGGGAGTTGATAGGATTGAACAAAGCAGGCTCTTTGAGGCCTTTTTGGGTTCTTCATCAATTTGGCAACCCCAGCCTTGCAAAGACCACCACACAACCTTGCCAGCACCAACAAATTCAGCCAAAATACATGATGAGTTTGCTGATGAGAACATCAATTCCAACATAATGACAACAAATCACACAGCACTGCCACCCCCTAAGGGTAGCATTAGCAACAAACAAGTTGGTGCCATGTTGGGGAACTCACTCAATGTTGCAGCCCCACCATTCTATGCATCAAAATCTATGTTGAGGGAACCAATTGAGCACCAGTTCTCAGAGACCCTCAAGAGAACAAGGTCTGGAAATGCTGCAGGGTCCATGAGAGTAGGGAGTGATGTGAGGGATACCAACAACAACAAGTTGCAGGTGGAATTAGGGGTGCCAGTGCCTGAGAACAAAACAAGGAGGCTCTCATCAGAGGATGCTGAGAAGAACAAGTTAACAGACTTGTTGCCTGACGACGACGACTTCGAAGAGGCCATTCTTGCTGCAATTTTGGGACCCCCAAATGAATCAGATAAAGCTAATGACACAAGCAGCAGCACCACCACCTCCAGGATTTTGCAGAGGAACATTGATAAGAGGCTTAAGGTTTTTCAGGATATCACATTATCTCTGAGTCCAACTCCAAGGGCCTGA 1491 0.4728 MLQDMWNAPPGFRPSKSAPSSPAKPLGVPRTRSESFHVAHKVPVGDSPYVRAKNVQLVDKDPERAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLKRKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEEAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLYRVKPAVIDGPRGSDSHLKAYERAQQMLKDLESEMMNKGVDRIEQSRLFEAFLGSSSIWQPQPCKDHHTTLPAPTNSAKIHDEFADENINSNIMTTNHTALPPPKGSISNKQVGAMLGNSLNVAAPPFYASKSMLREPIEHQFSETLKRTRSGNAAGSMRVGSDVRDTNNNKLQVELGVPVPENKTRRLSSEDAEKNKLTDLLPDDDDFEEAILAAILGPPNESDKANDTSSSTTTSRILQRNIDKRLKVFQDITLSLSPTPRA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02235 496 MobiDBLite consensus disorder prediction 449 470 - -
Pumo4g02235 496 ProSiteProfiles TPR repeat region circular profile. 176 209 - -
Pumo4g02235 496 MobiDBLite consensus disorder prediction 1 32 - -
Pumo4g02235 496 PANTHER PROTEIN POLLENLESS 3-LIKE 2 15 488 IPR044961 -
Pumo4g02235 496 Gene3D Tetratricopeptide repeat domain 54 237 IPR011990 GO:0005515
Pumo4g02235 496 Coils Coil 246 273 - -
Pumo4g02235 496 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Pumo4g02235 496 SUPERFAMILY TPR-like 57 283 IPR011990 GO:0005515
Pumo4g02235 496 Coils Coil 89 116 - -
Pumo4g02235 496 SMART tpr_5 176 209 IPR019734 GO:0005515
Pumo4g02235 496 Pfam Tetratricopeptide repeat 178 209 IPR001440 GO:0005515
Pumo4g02235 496 MobiDBLite consensus disorder prediction 456 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02235 Pumo-Chr4 33032811 33035158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02235 - - gmx:100788369 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02235 4 33032811 33035158 Pumo4g02235 4 33032811 33035158 ECH