LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g02218	ATGAAGGATGTGATTGTGAACAAGTTCAAACCCAAGACCCCATACATTGGTAGATGCCTTCTCAACACAAAGATCACTGGAGATGATGCTCCAGGAGAAACTTGGCACATGGTCTTCAGCACCGAGGGAGAGGTTCCTTACAGAGAAGGGCAATCAATTGGGGTAATTCCAGAAGGTCTTGACAAGAATGGCAAACCTCACAAACTGAGATTGTATTCTATTGCTAGCAGTGCCCTTGGTGATTTTGGAGATTCCAAGACTGTTTCTCTATGCGTGAAACGGCTAGTGTACACTAATGAAAATGGAGAAATTGTCAAGGGAGTCTGCTCAAATTTCTTGTGTGACCTGAAGCCGGGAGCTGAAGTAACAATAACTGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCTAATGCCACCGTCGTCATGTTGGCAACTGGAACCGGGATTGCCCCATTTCGCTCATACTTATGGAAAATGTTCTTCGAGAAGCACGAAGATTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTTCCTACAAGCAGCTCATTGCTCTACAAGGAGGAATTTGAAAAGATGCAGGAGAAATATCCTGACAACTTCAGGCTTGACTTCGCTGTGAGCAGAGAGCAAACAAACGAGAAAGGAGAGAAGATGTACATCCAAACCCGAATGGCTCAATATGCAGAAGAGCTTTGGGAATTACTGAAGAAGGATAATACTTTTGTGTATATGTGTGGACTAAAAGGAATGGAAAAGGGAATTGATGACATTATGGTGTCATTGGCTGCCAGAGATGGTAAGACATTTTCCTTTCTTCACACTTGGGGGGAAACCCTTTTGTCTTGGTACATCATTTGGAATTTTGGATAG	882	0.4331	MKDVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIPEGLDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVTITGPVGKEMLMPKDPNATVVMLATGTGIAPFRSYLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMQEKYPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAARDGKTFSFLHTWGETLLSWYIIWNFG	293

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g02218	293	CDD	CYPOR_like_FNR	7	276	-	-
	Pumo4g02218	293	Gene3D	Translation factors	1	128	-	-
	Pumo4g02218	293	SUPERFAMILY	Riboflavin synthase domain-like	3	133	IPR017938	-
	Pumo4g02218	293	PIRSF	Frd-NADP+_RD	1	283	IPR015701	GO:0016491
	Pumo4g02218	293	FunFam	Ferredoxin--NADP reductase, chloroplastic	129	279	-	-
	Pumo4g02218	293	PIRSF	FNR-PetH	1	282	IPR035442	GO:0016491
	Pumo4g02218	293	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	12	134	IPR017927	GO:0016491
	Pumo4g02218	293	PANTHER	-	2	272	IPR015701	GO:0016491
	Pumo4g02218	293	Gene3D	-	129	283	IPR039261	-
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	70	77	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	143	162	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	185	196	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	221	237	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	107	116	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	245	253	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	47	57	IPR001709	GO:0016491
	Pumo4g02218	293	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	173	182	IPR001709	GO:0016491
	Pumo4g02218	293	Pfam	Oxidoreductase NAD-binding domain	144	258	IPR001433	GO:0016491
	Pumo4g02218	293	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	132	270	IPR039261	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo4g02218	Pumo-Chr4	32693452	32697115	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g02218	K02641		-	gmx:100793840	539.265

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo4g02218	4	32693452	32697115	Pumo4g02218	4	32693452	32697115	ECH