Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02217 ATGGCTGACATAGTGAAGCAGCTGTTGGCGAAGCCGATCCAATTGGCGGACCAAGTGGCCAAGGCGGCGGAAGAGGCAAGCTCCTCGTTCAAGCAGGAATGCTTAGAACTCAAATCCAAGACCGACAAGGTGGCGGGGCTTCTCCGGCAGGCCGCACGTGCGAGCTCCGACCTCTACGAGCGCCCGACACGGCGCATCATCGCCGACACCGAGCTCGTCCTCGACAAGGCCCTGTCTTTGGTCCTAAAGTGCCGCGCGAACGGCCTCATGAAGCGCGTCTTCAGCATCATCCCCACCGCCGCGTTCCGCAAGATGTCGTCGCAGCTCGAGAACTCCATCGGCGACATGTCGTGGCTCCTCCGCGTCTCGGCCCCCGCGGAGGACCGCGGCGACGAGTACCTCGGTCTCCCTCCCATCGCCGCCAACGAGCCCATCCTCGGCCTCATCTGGGAGCAGGTCGCCATCCTCCACACGGGCTCGCTCGACGACCGATCCGACGCCGCCGCCTCCCTCGTGTCGCTCGCACGTGACAACGACAGGTACGGGAAGCTCATCATAGAAGAAGGCGGGGTGGGGCCCCTGTTGAAGCTCATCAAGGAAGGTAAAAAAGAGGGTCAGGAGAACGCTGCCAGAGCTATTGGGCTTCTGGGCCGCGACCCTGAGAGCGTGGAACTCATGATCCATGCCGGCGTGTGCTCTGTTTTCGCCAAAGTCCTCAAGGAAGGTCCCATGAAAGTGCAAGCTATGGTTGCTTGGGCTGTGTCTGAATTAGCTTCTAAGTACCCCAAATGCCAAGATCTTTTCCTGCAGCATAATATTGTTCGCTTGCTTGTCAGTCATCTCGCGTTTGAAACCGTTCAGGAGCATAGTAAATATGCCATTGTTAGCAACAAACCAACATCAATCCATGCTGTTGTGATGGCTAGTAATAATAATAATAACAATTCTGATGGCAATGGAGTGAAAAAGGAGAGTGAAGATGAGGAAAAGCCGATGCAAAGTAGGATGCAGCATCCCTTGGGTGATAGGTCAACAAATCAGATGCATAAAGTGGTTACAAGTACCATGGCAATGCATGCTGCCAACAAGCAACAGGGGAATGAAGGGACTCAGAATTCACAGGGTGCTCAGCCAAAGGCCAATGGGAATAGCAATGGCAAGCAAAACCATCAGTCTCACCAGCAAAGTTATTCATATTCTGGGATGAACATGAAGGGGAGGGAACTCGAGGACCCTGAGAATAAGGCTTACATGAAGGCAATGGCTGCTAGAGCCCTCCGGCAGCTAGCGAAGGGTAACGCGGCCATTTGTCGGAGCATCACGGAGTCGAGGGCGCTGTTGTGCTTTGCCATTCTACTTGAGAAAGGGACTGAGGATGTGAAGTACAACTCTGCCTTGGCAGTGAAGGAGATCACAGCAGTGGCGGAAAAAGATGCAGAATTGAGAAGATCAGCATTCAAGCCTAATTCTCCGGCCTGCAAGGCGGTTGTTGATCAAGTGCTTAAGATCATAGAGAAGGAAGAACCCAAACTCCTGATTCCTTGCGTAAAGGCTATTGGGAACTTGGCAAGGACATTCCGGGCAACGGAGACAAGGATAATCGGTCCCTTGGTCCGGCTTCTCGACGAAAGAGAGGCAGAAGTGTCTAGGGAAGCAGCAATCTCCCTCACAAAATTTGCCTGCTTGGAAAACTACCTCCACCTTGATCACTCCAAGGCAATTATAAGTGCAGGTGGTGCAAAACACTTGGTCCAGCTTGCATATATAGAACACACAGTTCAGATTTCAGCACTAGTTCTGCTCTCCTACATTGCCTTGCATGTGCCAGACAGTGAGGAACTTGCTCGGGCTGAGGTGCTTGGAGTGCTTGAATGGGCTTCCAAGCTACCAAACGTGACGCAGGACGAAACCCTCGAGGAGTTGTTGCCGGAATCCAAGGGTAGGCTTGAGCTTTATCAGTCTAGAGGCTCAAGAGGGTTCCAAAAATTACATCAATAG 1998 0.53 MADIVKQLLAKPIQLADQVAKAAEEASSSFKQECLELKSKTDKVAGLLRQAARASSDLYERPTRRIIADTELVLDKALSLVLKCRANGLMKRVFSIIPTAAFRKMSSQLENSIGDMSWLLRVSAPAEDRGDEYLGLPPIAANEPILGLIWEQVAILHTGSLDDRSDAAASLVSLARDNDRYGKLIIEEGGVGPLLKLIKEGKKEGQENAARAIGLLGRDPESVELMIHAGVCSVFAKVLKEGPMKVQAMVAWAVSELASKYPKCQDLFLQHNIVRLLVSHLAFETVQEHSKYAIVSNKPTSIHAVVMASNNNNNNSDGNGVKKESEDEEKPMQSRMQHPLGDRSTNQMHKVVTSTMAMHAANKQQGNEGTQNSQGAQPKANGNSNGKQNHQSHQQSYSYSGMNMKGRELEDPENKAYMKAMAARALRQLAKGNAAICRSITESRALLCFAILLEKGTEDVKYNSALAVKEITAVAEKDAELRRSAFKPNSPACKAVVDQVLKIIEKEEPKLLIPCVKAIGNLARTFRATETRIIGPLVRLLDEREAEVSREAAISLTKFACLENYLHLDHSKAIISAGGAKHLVQLAYIEHTVQISALVLLSYIALHVPDSEELARAEVLGVLEWASKLPNVTQDETLEELLPESKGRLELYQSRGSRGFQKLHQ 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02217 665 Gene3D - 150 317 IPR011989 -
Pumo4g02217 665 Gene3D - 405 640 IPR011989 -
Pumo4g02217 665 FunFam Armadillo repeat only 4 2 122 - -
Pumo4g02217 665 FunFam Armadillo repeat only 2 151 319 - -
Pumo4g02217 665 Pfam Armadillo/beta-catenin-like repeat 184 215 IPR000225 GO:0005515
Pumo4g02217 665 MobiDBLite consensus disorder prediction 362 398 - -
Pumo4g02217 665 PANTHER ARMADILLO REPEAT ONLY 4 1 657 - -
Pumo4g02217 665 SUPERFAMILY ARM repeat 154 628 IPR016024 -
Pumo4g02217 665 Gene3D - 3 122 IPR036537 GO:0007166
Pumo4g02217 665 SMART arm_5 567 606 IPR000225 GO:0005515
Pumo4g02217 665 SMART arm_5 177 218 IPR000225 GO:0005515
Pumo4g02217 665 SMART arm_5 219 259 IPR000225 GO:0005515
Pumo4g02217 665 SMART arm_5 433 473 IPR000225 GO:0005515
Pumo4g02217 665 SMART arm_5 489 524 IPR000225 GO:0005515
Pumo4g02217 665 MobiDBLite consensus disorder prediction 308 345 - -
Pumo4g02217 665 MobiDBLite consensus disorder prediction 320 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02217 Pumo-Chr4 32682145 32685103 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02217 - - gmx:100794693 1158.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02217 4 32682145 32685103 Pumo4g02217 4 32682145 32685103 ECH