Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02170 ATGTGGAAAACGATTGAGGATGTTTCTTTGCCTGATATGCCTGTTCATGTTAGTGTTGAGGGTAAAAGTCACGGTTTGGAAGGGAGGGTGGATTTGAAAGGCGAGTGTGGCAATGGTGGGTTGAAATTAAATGCTTCTGATGCTGTGTTGAGAGACGATGTAAAGAACGGTTCGGAATGTCTCTTGAACTTGGCAAATGAGGATGGGCTTATCTTTATAGATGTGGAGGGGAAGGAGGTGGCCGCTGCGGATAAGGATAAGCCTTGTTATGATAATGTTGATTCGCTTCTGTTGAGTTCTCCCTGTGATGTTCAGGGTAATGGTGATGGTGATGGCCGTGAGTTGCAGAAGATGGAGGTGGAAACAAAAGTTGCTGTGCCCAGTGGGTGTGCTTCCGATGGGTTAGAGGTTGTTGCTAACCCATTAGGTGGCAGTTGTGGTGATCAGCATTTTGTTTCTGATTCTGGAAACGGTGCCGGATCGTTTGCTGCAGCACAAAGTGCTCTCCCTGAATACAGTGAAGGGTTTATGATCTGTGTGTTGAACACAGAGGACCCTGATATCCCGTGCAATGATAGTACGGGTGTATCCACTGTAGTTCCAGAGTTGGCAGCTTTGAAATCCCAACCTAATGTTAAAGAGGTGGGTTATTCAGCAAATGATCTAGACAGAAGCCTGAAGAAAGAAGCCGTTCTTTCTGAGTCTTTTGCAGCTTCACCAACAGTTCGACAGGGGTTGGTGCCTAATGTGAATTCAAGCCACCGACCTGTTGTTCTTGGACTGAAGAGTGAAAATCTTGGAAGAAACTCTATATCTGCAGTTTCTAGACTGAATAACAATGTCAATGTCATCATCAACCCATGTCATAGCAGATTAGTTCGTGCAAGTGTGATGCCTGCCTCAGATGGACATCTGAAACAAGAGGAAACTAATGCTCCTGCTTCTGCACATGTGAAGGCTGAGGAACATAAGGCTTTATCTAAATCAGAAGCAAAATCATTGTCTCTCAATCAGGAAGGAGGTGATATTGAAGACGATGATGATGATGATAATGATATTGATGACAATGATGATGAACTTCCTAACTTTTCTGATGTCGAGGAAATGATTCTTGGCATGGATTTATCTCCAGCGGATCAAGATACAAATGCAAGTAGAGAAGTCTTGAAATATCAACACGAACAAAGTAAGAGGACAATAATGAGATTGGAGCAAGGGGCTCAGTCCTCGATGGGAAGAGCCATTACAGCTCAGGGTGCGGGTGCGTTTGCAGTAGTATATGGGCGTTTTCTGAAGAAATATATCAGAAAAAGCAAGGTTATACTTGGCAGAGCAACAAATGATATACATGTTGATATTGACTTGGGAAAAGAAGGGCAAGCGGCTAACAAAATATCTAGAAAACAGGCTTTAATAAAGATGGAAGGAGATGGTTCTTTCATTATTAAAAATCTTGGCAAGAGATCCATCTTCTTGAATGGCAAAGAAATTGCCACAGGACAAGCACGGGGTCTTAGTGCTAGTAGTGTGATCGAGATTATGGGCATTTCACTCATCTTTGAGGTCAACAATAGGTGCGTGAAGAAGTTTTTAGAAAATGAGAATGAAAAAAGAGGAAGATAA 1623 0.427 MWKTIEDVSLPDMPVHVSVEGKSHGLEGRVDLKGECGNGGLKLNASDAVLRDDVKNGSECLLNLANEDGLIFIDVEGKEVAAADKDKPCYDNVDSLLLSSPCDVQGNGDGDGRELQKMEVETKVAVPSGCASDGLEVVANPLGGSCGDQHFVSDSGNGAGSFAAAQSALPEYSEGFMICVLNTEDPDIPCNDSTGVSTVVPELAALKSQPNVKEVGYSANDLDRSLKKEAVLSESFAASPTVRQGLVPNVNSSHRPVVLGLKSENLGRNSISAVSRLNNNVNVIINPCHSRLVRASVMPASDGHLKQEETNAPASAHVKAEEHKALSKSEAKSLSLNQEGGDIEDDDDDDNDIDDNDDELPNFSDVEEMILGMDLSPADQDTNASREVLKYQHEQSKRTIMRLEQGAQSSMGRAITAQGAGAFAVVYGRFLKKYIRKSKVILGRATNDIHVDIDLGKEGQAANKISRKQALIKMEGDGSFIIKNLGKRSIFLNGKEIATGQARGLSASSVIEIMGISLIFEVNNRCVKKFLENENEKRGR 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02170 540 Gene3D - 375 537 - -
Pumo4g02170 540 MobiDBLite consensus disorder prediction 315 329 - -
Pumo4g02170 540 SMART FHA_2 439 497 IPR000253 GO:0005515
Pumo4g02170 540 PANTHER MICROSPHERULE PROTEIN 1 147 537 IPR037912 GO:0002151|GO:0031011|GO:0071339
Pumo4g02170 540 SUPERFAMILY SMAD/FHA domain 432 523 IPR008984 GO:0005515
Pumo4g02170 540 ProSiteProfiles Forkhead-associated (FHA) domain profile. 440 497 IPR000253 GO:0005515
Pumo4g02170 540 Pfam FHA domain 440 513 IPR000253 GO:0005515
Pumo4g02170 540 MobiDBLite consensus disorder prediction 340 360 - -
Pumo4g02170 540 MobiDBLite consensus disorder prediction 305 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02170 Pumo-Chr4 31683682 31687182 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02170 - - gmx:100779823 673.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02170 4 31683682 31687182 Pumo4g02170 4 31683682 31687182 ECH