Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02160 ATGAGGTATTACTATTCTCGCTTCAAACACTTATCCCAACTCCTCAAAACCCTAACCCCACCCCAACGGATCCCACTCTCACCCCGACCGCGTCCCTCCCACGCGCGCGAGTACTGCAGCAGCAGCAGCGCGTCGCAGTCGCAGTCGCAGGGTTCGGAGAAGGTGGCGGCGATCGTGGACGAGGTGATGGGGCTGACGCTGCTGGAAGTGATGGACCTGGTGGAGGTGATGCGCGAGAAGCGCGGCGTCAACGAGCTTCCGATCATGATGCTCATGGTGCCGGGAATGGGCGTGCGCGGCGTGCCGAGGGGCGCGCCGAAGGGTGGCGGCGGGGGCGCCGCCGGAGTGGAAGTGAAGGCGGCGGAGAAGACGGCGTTTGATGTGAAGCTCGAGGGTTTCGACGCGGCGGCGAAGATCAAGGTGATCAAGGAGGTGAGGACGTTCACGAGCTTGGGGTTGAAGGAGGCCAAGGACTTGGTGGAGAAGGTCCCCGCAGTGTTGAAGAAAGGGGTCACAAAAGAAGAGGCTGAGAGTATTATTGCCAAGATGAAGGAGGTTGGCGCTAAGGTTTCTATGGAATAA 582 0.6031 MRYYYSRFKHLSQLLKTLTPPQRIPLSPRPRPSHAREYCSSSSASQSQSQGSEKVAAIVDEVMGLTLLEVMDLVEVMREKRGVNELPIMMLMVPGMGVRGVPRGAPKGGGGGAAGVEVKAAEKTAFDVKLEGFDAAAKIKVIKEVRTFTSLGLKEAKDLVEKVPAVLKKGVTKEEAESIIAKMKEVGAKVSME 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02160 193 Hamap 50S ribosomal protein L7/L12 [rplL]. 52 193 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pumo4g02160 193 NCBIfam 50S ribosomal protein L7/L12 55 192 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pumo4g02160 193 SUPERFAMILY ClpS-like 122 192 IPR014719 -
Pumo4g02160 193 CDD Ribosomal_L7_L12 53 192 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pumo4g02160 193 PANTHER 39S RIBOSOMAL PROTEIN L12 35 193 IPR000206 GO:0003735|GO:0005840|GO:0006412
Pumo4g02160 193 MobiDBLite consensus disorder prediction 19 52 - -
Pumo4g02160 193 Pfam Ribosomal protein L7/L12 C-terminal domain 126 192 IPR013823 GO:0003735|GO:0006412
Pumo4g02160 193 MobiDBLite consensus disorder prediction 36 52 - -
Pumo4g02160 193 Gene3D - 119 192 IPR014719 -
Pumo4g02160 193 FunFam 50S ribosomal protein L7/L12 122 193 - -
Pumo4g02160 193 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 54 128 IPR036235 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02160 Pumo-Chr4 31432778 31435266 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02160 K02935 - gmx:100775592 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02160 4 31432778 31435266 Pumo4g02160 4 31432778 31435266 ECH