Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02152 ATGTCATCATTCTTTTCCTCCTCCACGTCGGAGTCCAACCTCGCCACCGCGAAGACGGTCCTCTCGGCGGCGGCCTCCGTGGCCGCCACCGCAATGGTGATCCGCTCGGTGGCCAGCGACCTCCTCCCGTCGGAGCTCCGCTCCTACATCACCGGCGGCATCCACAGCATCCTCTCGCGGTTCTCGTCGGAGATAACTCTGGTGATCGACGAGTTCGACGGCCTCGTCAACAACCAAATCTACGAGGCCGCGGAGACCTACCTCGGCTCCAAAATCTCTCCCTCCACGCAGAGACTCAAAGTCAGCAAACCCGACGAGGAGAAAACCTTCTCCCTCACAATGGAGCGCAACGAGTCCCTAACGGACGTCTTCAACGGCGTGAAATTTAACTGGATCCTCGTCTGCCGTCAAGTCGAGTCCAGAAACTTCCACAACCCGCGCGACCTCAACTCCACCTTAAAATCCGAGGTTCGCTCTCTGGAACTCACGTTCCACAAGAAGCACAAGGACATGGTGCTCAACACCTACCTTCCCCACGTTCTCCGAGAAGCGAAATCCATGAAGCAGGAAACCAAGGCGCTCAAGATTTTTACCGTGGACTGCCATAACATGTACGGCAACATCAACGACGCGTGGGTGGGGATGAAGCTGGACCACCCCGCCACGTTCGAGACGGTGGCGATGGAGCGCGACGTGAAGGAGTTCGTGATTAGGGATTTGGAGAGGTTTGTGAAGAGGAAGGAGTATTATAGGAAGGTCGGGAAGGCGTGGAAGAGAGGCTACCTGCTGTATGGTCCGCCGGGAACCGGGAAGTCTAGTTTGATTGCTGCTATGGCTAATTACTTGCGGTTTGATATCTATGACCTGGAGCTCACCGAGTTGCAGGTTAACTCGGAACTCAGGAGATTGCTCATTGCGATGGCTAATAGGTCCATTCTTGTTGTTGAGGACATTGATTGCACTGTTGAGTTTCACGATCGTAGAGCAGAGGCCAGAGCCGCCTCCGGACATAACAACGACAGCCAGGTTACACTATCAGGGTTGCTAAATTTCATTGATGGGTTATGGTCAAGTTGTGGGGATGAGAGGATCATAGTGTTCACAACAAATCACAAGGACAAGCTTGACCCTGCATTGCTGCGCCCTGGTCGCATGGATGTTCACATTCACATGTCCTATTGCACTCCCTGCGGTTTTCGGCAGCTTGCTTCCAATTACCTCCGAATCAAAGAACATTCTCTCTTCGAACAGATTGAGGAAGAGATTCAGAAAACCCAGGTGACTCCTGCTGAAGTGGCAGAGCAGCTTCTGAAGAGCAGCGACATTGAAACTAGCCTTGAACAGCTTATAGATTTCATGAGAATGAAGAAAGAAACTCAGAAACTGGAGGCTGAAAAGAAGGAGCAGGAGGCCAAAGATAAAGAGGAACAGCAGAGGAAGGAGCTTGATGGTGGTGGGTTGTTCAAGTGGGATTCAATTAATTTGGACCACCCTTCAACGTTTGAGACACTGGCTTTGGAGGCAGAGCAGAAGAGTGCCATAATAGAGGATTTGAACAGGTTTGTGAGGAGGAGGGAATTTTATAGGAAAGTTGGGAGGGCTTGGAAGCGCAGCTACTTGTTGTATGGCCCTCCGGGTACCGGCAAATCGAGCTTGATCGCAGCCATGGCTAATTACTTGAAGTTTGATATCTATGATCTTCAACTTCACAACTTGGTGACCGATTCTGATCTCAGAAGGTTGTTGCTGGCAACAACGAACAGGTCTATTTTGGTCATTGAAGACATTGATTGCAGTGTGGATCTGCCGGCGCGTATGCATGAAGATGGATGTAAGCATCCTGATTTGACTTTGGGTGGATTACTCAACTTCATAGATGGGCTATGGTCAAGTTGTGGAGACGAGAGAATCATCATACTCACCACCAACCACAAGGAAAGGCTAGACCCGGCACTGTTGCGGCCAGGAAGAATGGACATGCACATTCACATGTCCTATTGCTCCTACCACGGCTTCAAGGTTTTGGCCTCAAACTACTTAGGCATTTCCTCCGATCACCGCCTCTTCGGGGAGATCGAAGGGCTGATGGAGCACACGCAGATAACCCCAGCACAAGTGGCAGAGGAATTGATGAAGAGCGAAGATGCCAACGTGGCGCTAGATGGATACCTAAAGCTGCTTAAGCGGAAGAAGATGGAAGGTGATGTGTGTGAGAATGATGGTTCGGATAAAACAGAACTACACCAATCTAAAAGGTCCAAAGTTGGTTGCAAGTAG 2277 0.5072 MSSFFSSSTSESNLATAKTVLSAAASVAATAMVIRSVASDLLPSELRSYITGGIHSILSRFSSEITLVIDEFDGLVNNQIYEAAETYLGSKISPSTQRLKVSKPDEEKTFSLTMERNESLTDVFNGVKFNWILVCRQVESRNFHNPRDLNSTLKSEVRSLELTFHKKHKDMVLNTYLPHVLREAKSMKQETKALKIFTVDCHNMYGNINDAWVGMKLDHPATFETVAMERDVKEFVIRDLERFVKRKEYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRFDIYDLELTELQVNSELRRLLIAMANRSILVVEDIDCTVEFHDRRAEARAASGHNNDSQVTLSGLLNFIDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHIHMSYCTPCGFRQLASNYLRIKEHSLFEQIEEEIQKTQVTPAEVAEQLLKSSDIETSLEQLIDFMRMKKETQKLEAEKKEQEAKDKEEQQRKELDGGGLFKWDSINLDHPSTFETLALEAEQKSAIIEDLNRFVRRREFYRKVGRAWKRSYLLYGPPGTGKSSLIAAMANYLKFDIYDLQLHNLVTDSDLRRLLLATTNRSILVIEDIDCSVDLPARMHEDGCKHPDLTLGGLLNFIDGLWSSCGDERIIILTTNHKERLDPALLRPGRMDMHIHMSYCSYHGFKVLASNYLGISSDHRLFGEIEGLMEHTQITPAQVAEELMKSEDANVALDGYLKLLKRKKMEGDVCENDGSDKTELHQSKRSKVGCK 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02152 758 SMART AAA_5 535 668 IPR003593 GO:0016887
Pumo4g02152 758 SMART AAA_5 257 395 IPR003593 GO:0016887
Pumo4g02152 758 ProSitePatterns AAA-protein family signature. 636 654 IPR003960 GO:0005524|GO:0016887
Pumo4g02152 758 MobiDBLite consensus disorder prediction 461 481 - -
Pumo4g02152 758 ProSitePatterns AAA-protein family signature. 363 381 IPR003960 GO:0005524|GO:0016887
Pumo4g02152 758 Gene3D - 390 462 - -
Pumo4g02152 758 Gene3D - 663 734 - -
Pumo4g02152 758 CDD RecA-like_BCS1 514 664 - -
Pumo4g02152 758 Gene3D - 211 389 IPR027417 -
Pumo4g02152 758 Gene3D - 489 662 IPR027417 -
Pumo4g02152 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 470 719 IPR027417 -
Pumo4g02152 758 Pfam ATPase family associated with various cellular activities (AAA) 540 665 IPR003959 GO:0005524|GO:0016887
Pumo4g02152 758 Pfam ATPase family associated with various cellular activities (AAA) 262 392 IPR003959 GO:0005524|GO:0016887
Pumo4g02152 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 444 IPR027417 -
Pumo4g02152 758 PANTHER BCS1 AAA-TYPE ATPASE 22 461 - -
Pumo4g02152 758 CDD RecA-like_BCS1 236 391 - -
Pumo4g02152 758 Coils Coil 450 481 - -
Pumo4g02152 758 Pfam Domain associated at C-terminal with AAA 42 135 IPR025753 -
Pumo4g02152 758 MobiDBLite consensus disorder prediction 735 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02152 Pumo-Chr4 31230597 31250587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02152 500 659 Miscellaneous Gene Families AT3G47060 32.749 4.97e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02152 - K08900 gmx:100788420 795.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02152 4 31230597 31250587 Pumo4g02152 4 31230597 31250587 ECH