Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02133 ATGGAGAAGCTTGCTTCTTCAACTGCAACTGTTCCCACTCAACAATTCCTCTTTCAACTTCACCACCCTCTCTTCTTCCCCCTTCCCGCCTTCTCCACCTTCCACCGGAACCTCACCGAATCGCTGTCACAGCTTTGTTGCAAAAGCAGACACCACCGTCGCCTCCAAGCATTCCCCACCAAACAAGACCACCAGCTCTGGGTCAGCGAAGAAGAGTTAGAACTAGAATTGGAAGAAGGAGAAGAAGTAGAAGAAGATTCGTATTTGGACGATGATGATGATGACTCCTCGTTCTTGTCCCTCAGCGACAAGCCCGACAGGAACATGGCCTTGCTCGACGATTACGAGGCCGAGGAACTCGACTTTGATTACGGCCCCGACCACCGAAGCGGATATGTGGCGTTACTTGGGAAGCCAAATGTTGGGAAGAGTACACTGGCGAACCAAATGCTTGGCCAAAAGTTGTCAATAGTTACAGATAAACCTCAAACAACGAGGCATCGAATTCTGTGTATATGTTCTGCCTCCGATTATCAGATGATACTTTATGACACACCTGGTGTTCTACAGAAGGAAATGCACATGTTAGACTCAATGATGATGAAAAACGTTCGCAGTGCTGCAGTTAATGCTGACTGTGTATTGGTTCTTGTGGATGCACGTAAGGCTCCTGAAAAAATTGATGGAGTGTTGGAAGATGGCATAGGAGACCTCAAAGATAAACCCCCCACTCTACTGATTCTAAACAAGAAGGACCTTGTTAAACCTGGCGAACTTGCAAAGAAACTTGAGTGGTATGAGAAATTTACTGATGTTGATGAGGTTATACCAGTTAGTGCCAAATATGGTCAGGGGGTTGAAGATGTAAAGGACTGGATACTGTCAAAGCTTCCCAATGGACCAGCTTATTATCCAAAGGATATAGTCAGTGAGCATCCAGAAAGATTTTTTGTGGCTGAAATTGTTAGAGAAAAGATTTTTATGCAGTATCGAAATGAAATTCCATATGCATGTCAGGTAAATGTTGTAAACTATAAAGCTCGGCCGAATGCAAAAGATTACATACAAGTAGAGATTTTGGTTGAGAAAAACTCACAGAAGATTATCCTTATTGGAAGGGAAGGAAAGGCTTTGAAACTGCTTGCAATGGCTGCCCGCCTTGATGTTGAAGATTTTTTACAGAAGAAAGTTTATCTTGAGATTGAAGTGAAGGTTAGAGCAAATTGGCGACAAGATGAAGGGCTTCTTAATCACTACGGTTATGGGGGTCAGATACGTGTTATATAA 1287 0.4351 MEKLASSTATVPTQQFLFQLHHPLFFPLPAFSTFHRNLTESLSQLCCKSRHHRRLQAFPTKQDHQLWVSEEELELELEEGEEVEEDSYLDDDDDDSSFLSLSDKPDRNMALLDDYEAEELDFDYGPDHRSGYVALLGKPNVGKSTLANQMLGQKLSIVTDKPQTTRHRILCICSASDYQMILYDTPGVLQKEMHMLDSMMMKNVRSAAVNADCVLVLVDARKAPEKIDGVLEDGIGDLKDKPPTLLILNKKDLVKPGELAKKLEWYEKFTDVDEVIPVSAKYGQGVEDVKDWILSKLPNGPAYYPKDIVSEHPERFFVAEIVREKIFMQYRNEIPYACQVNVVNYKARPNAKDYIQVEILVEKNSQKIILIGREGKALKLLAMAARLDVEDFLQKKVYLEIEVKVRANWRQDEGLLNHYGYGGQIRVI 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02133 428 MobiDBLite consensus disorder prediction 78 102 - -
Pumo4g02133 428 FunFam GTPase Era 126 309 - -
Pumo4g02133 428 FunFam GTPase Era 310 424 - -
Pumo4g02133 428 Gene3D - 126 310 IPR027417 -
Pumo4g02133 428 Hamap GTPase Era [era]. 128 421 IPR005662 GO:0003723|GO:0005525
Pumo4g02133 428 ProSiteProfiles Type-2 KH domain profile. 330 407 IPR004044 GO:0003723
Pumo4g02133 428 Pfam 50S ribosome-binding GTPase 133 250 IPR006073 GO:0005525
Pumo4g02133 428 MobiDBLite consensus disorder prediction 78 97 - -
Pumo4g02133 428 CDD Era 128 297 IPR030388 GO:0005525
Pumo4g02133 428 Gene3D - 311 425 IPR015946 -
Pumo4g02133 428 PANTHER GTPASE ERA 88 413 IPR005662 GO:0003723|GO:0005525
Pumo4g02133 428 NCBIfam small GTP-binding protein domain 133 292 IPR005225 GO:0005525
Pumo4g02133 428 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 306 421 IPR009019 GO:0003723
Pumo4g02133 428 ProSiteProfiles Era-type guanine nucleotide-binding (G) domain profile. 129 299 IPR030388 GO:0005525
Pumo4g02133 428 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 330 IPR027417 -
Pumo4g02133 428 Pfam KH domain 333 410 IPR004044 GO:0003723
Pumo4g02133 428 CDD KH-II_Era 319 405 - -
Pumo4g02133 428 NCBIfam GTPase Era 131 404 IPR005662 GO:0003723|GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02133 K03595 - gmx:100795454 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02133 4 30437257 30441484 Pumo4g02133 4 30437257 30441484 ECH