Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02110 ATGAAGTTGAATTTGAGTTATGATAAGGAAAGGAACTCACTCCATTGTTCATTTATTGGCTTAATTGGTTCCAGAAAGAAGCAAGATGATAAAAGCAGTGCTGGTGTTGAACACGCAGGGGAAGCCTCGTCTCGCCAAATTCTACGAATTTCAGATCAGCCCGTGGAGAAGCAGCAGGAAGCTATTCGCAATGTGTTTTCAGTATTATGCAGTAGACCGGAACATGTCAGCAATTTTGTGGATGCTGAATCCTTCTTTGGCCCGGACTCTCGCCTTGTCTACAAGCACTTTGCAACTTTATATTTTGTGTTCATATTTGATAGTTCTGAAAACGAGCTTGCTATGCTTGACTTGATACAAGTCTTTGTTGAAATATTGGACAAATGCTTCAGAAATGTATGCGAGCTTGATGTCGTGTACAACTATAGTAAGATGCATACTATAATAGATGAGATCATTCTCGGAGGCCAGGTGTTGGAGACAAGTTCAACCGAGGTTATGAAGGCTATTGAAGAAATATCAAGGCTTGAAGCAGCATCCAATTCAATCAATCTTGTTCCAAAATCTGTTTCTGGTTGGAGGTCGCGGTAA 591 0.4078 MKLNLSYDKERNSLHCSFIGLIGSRKKQDDKSSAGVEHAGEASSRQILRISDQPVEKQQEAIRNVFSVLCSRPEHVSNFVDAESFFGPDSRLVYKHFATLYFVFIFDSSENELAMLDLIQVFVEILDKCFRNVCELDVVYNYSKMHTIIDEIILGGQVLETSSTEVMKAIEEISRLEAASNSINLVPKSVSGWRSR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02110 196 Gene3D - 42 189 - -
Pumo4g02110 196 ProSitePatterns Clathrin adaptor complexes small chain signature. 92 102 IPR000804 GO:0006886|GO:0016192|GO:0030117
Pumo4g02110 196 Coils Coil 159 179 - -
Pumo4g02110 196 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 54 177 IPR016635 GO:0015031
Pumo4g02110 196 SUPERFAMILY SNARE-like 54 174 IPR011012 -
Pumo4g02110 196 Pfam Clathrin adaptor complex small chain 55 175 IPR022775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02110 Pumo-Chr4 30111718 30116937 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02110 K12399 - gmx:100781795 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02110 4 30111718 30116937 Pumo4g02110 4 30111718 30116937 ECH