Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02107 ATGTTTTGTGCTGCAGGTTGGGAATTAGTGCGTTTGGTGGTCACCATGTTCCTTCTCAGAAGGCAAACCCAGAATCAGCAGGAGAATGATTCCTCGTATCAGGATACAAAGGTGGCTGAACTCAGGGCTGCTCTTGGGCCCCTCTCTGGTCGTCGATTAAAGTATTGCACAGATGCATGTCTAAGGAGATATTTAGAAGCAAGGAACTGGAATGTTGATAAAGCCAAGAAAATGGTGGAGGAAACACTCAAGTGGAGGGCAACTTATAAGCCAGAGGAAATCCGTTGGGCTGAAGTAGCACATGAGGGTGAGACGGGAAAAGTCTCCAGAGCTAACTTTCATGATCGACTTGGGAGGACTGTGCTTATTATGAGGCCAGGGATGCAGAACACAACATCAGCTGAAGATAATATCAGGCATTTAGTCTATCTATTGGAAAATGCTATCCTAAATCTTTCTGAAGGTCAAGAACAAATGTCATGGTTGATAGACTTCACAGGATTATCACTTGGTACAAATATTTCTGTTAAAACAGCTCGTGATATTATTCACATTTTACAAAACCACTACCCAGAAAGGCTTGCTATTGCTTTTCTGTACAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGCCGTGAGATTCTTCCTGGACCCCAAGACAGTCCAGAAGGTGAAGTTTGTTTATCCTAACAATAAGGACAGTGTGGAGCTGATGAAATCACTCTTCGACATAGACAACCTTCCAAGTGAATTTGGGGGAAAAACAAGTTTAAAGTATGACCATGAAGAGTTCTCACGATTGATGACTGAGGATGATGTGAAAACTGCCAAGTTCTGGGGACTTGATGAGAAGCCCTTCAACCCTCCTAAGAAAGGCCATGCTGGAGCAGAGGTGGCACCAGAACCCGTGCCTGTTCAGGCAGTGGTTAGTTAG 936 0.4402 MFCAAGWELVRLVVTMFLLRRQTQNQQENDSSYQDTKVAELRAALGPLSGRRLKYCTDACLRRYLEARNWNVDKAKKMVEETLKWRATYKPEEIRWAEVAHEGETGKVSRANFHDRLGRTVLIMRPGMQNTTSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDFTGLSLGTNISVKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVRFFLDPKTVQKVKFVYPNNKDSVELMKSLFDIDNLPSEFGGKTSLKYDHEEFSRLMTEDDVKTAKFWGLDEKPFNPPKKGHAGAEVAPEPVPVQAVVS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02107 311 PANTHER GH16843P 24 285 - -
Pumo4g02107 311 Pfam CRAL/TRIO, N-terminal domain 57 80 IPR011074 -
Pumo4g02107 311 SUPERFAMILY CRAL/TRIO domain 97 272 IPR036865 -
Pumo4g02107 311 SMART CRAL_TRIO_N_2 57 82 IPR011074 -
Pumo4g02107 311 FunFam Phosphatidylinositol transfer protein 3 18 288 - -
Pumo4g02107 311 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 96 260 IPR001251 -
Pumo4g02107 311 MobiDBLite consensus disorder prediction 289 311 - -
Pumo4g02107 311 SUPERFAMILY CRAL/TRIO N-terminal domain 24 97 IPR036273 -
Pumo4g02107 311 SMART sec14_4 102 257 IPR001251 -
Pumo4g02107 311 CDD SEC14 114 255 IPR001251 -
Pumo4g02107 311 Gene3D - 15 285 IPR036865 -
Pumo4g02107 311 Pfam CRAL/TRIO domain 113 254 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02107 Pumo-Chr4 30089904 30093008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02107 61 249 Acyl Lipid Metabolism Gene Families AT5G47730 25.238 9.37e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02107 K26544 - gmx:100800024 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02107 4 30089904 30093008 Pumo4g02107 4 30089904 30093008 ECH