Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02098 ATGAGATATAGGATATCGTATTTGATGGACGAGATCTGGGAGAGGGCTGTGGAAACGGCGTTGGACGGCGAGAAGGACCACGCGGCCGCGCGGACGCTAACCCTAGACGGCGCCGCTAAGTGCGTTCAGGGACGGTTACCTCCGCCGAGCCTTCTGGAGCGGTTCCAGAACCTTCAGCACCTTTCGATAGCGAACGTCGGCGTTTCGTCGCTGGAGCAGTTTCCGCGGCTCCGGAATCTGCAGAAGCTGAACCTCTCCGACAACCGGATCGCCGGCGGCCTCGAGTTTCTGGTCCAGGCGGGGCTGGATTCGCTGCGCGACCTCGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTGAAGCTGGTCTCGCTGGATCTGTACGAGTGCCCCGTGACGCGCGTGAAGGATTATCGATCTAGGGTTTTCGGGTTGATCAAGTCGCTCAAGTACTTGGACAAGATGGATGCGGAGGAGAACGAGAGGCCTGAGAGTGACGACGAGGAAGAGGAGGAGGATGAGGATGAGGAGGAGGATGACCCTGGGAGTGGCGAGATTGACGGCGAGGAGGATCGACCGTTTGGGATTAACAATGGACACAGTGAAGGTGTGGATGGAGTTGTGGATGCTGACGACGAGGAGGAGAGTGATGCGGATGAGGAGGAGACGGAGACGTCTAGGCAGAGGGTGATTAACGTAGAGAGCCACAGGGAGAACGGGTTTCGCGTGGCCCCGGTGGAGGGGGATGACGTGGAGGAGGAGGATGATGAGGATGATTCTGGGGAGGAGATTGACGAGGAGGAGGGGGATGATGATGATGTGGTGGAGGTTCATGAGATTGAGGATAGTGATGATGAGGATGGGGTGGAGGAGTATGGTGAGGATGATGATGATGAGGACGATGAGGAGGAGGAGGAGGTGGATAACGATGAGGGGGATTTTGCGGAGCCCGAGAGTACTGGAAGGTTGACGAGTACTGAAGGGGAGATTGATGGGCATGAGCAGGGGGAGGAGGATGGGGATGATGATGATAATGGGGAGACTGGGGAGGATGAGATGGGGGTTGAAGATGATGGAGAGTTTGAAGACGACGATGAAGTGAGATAA 1128 0.5665 MRYRISYLMDEIWERAVETALDGEKDHAAARTLTLDGAAKCVQGRLPPPSLLERFQNLQHLSIANVGVSSLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEEDEDEEEDDPGSGEIDGEEDRPFGINNGHSEGVDGVVDADDEEESDADEEETETSRQRVINVESHRENGFRVAPVEGDDVEEEDDEDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEEYGEDDDDEDDEEEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDDDDNGETGEDEMGVEDDGEFEDDDEVR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02098 375 MobiDBLite consensus disorder prediction 339 375 - -
Pumo4g02098 375 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 18 357 IPR045081 -
Pumo4g02098 375 MobiDBLite consensus disorder prediction 255 321 - -
Pumo4g02098 375 Pfam Leucine-rich repeat 64 173 - -
Pumo4g02098 375 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Pumo4g02098 375 MobiDBLite consensus disorder prediction 214 228 - -
Pumo4g02098 375 SMART LRR_sd22_2 77 96 - -
Pumo4g02098 375 SMART LRR_sd22_2 102 123 - -
Pumo4g02098 375 MobiDBLite consensus disorder prediction 163 375 - -
Pumo4g02098 375 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Pumo4g02098 375 SUPERFAMILY L domain-like 48 164 - -
Pumo4g02098 375 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Pumo4g02098 375 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Pumo4g02098 375 MobiDBLite consensus disorder prediction 167 193 - -
Pumo4g02098 375 MobiDBLite consensus disorder prediction 229 254 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02098 - - gmx:100783409 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02098 4 29905994 29907121 Pumo4g02098 4 29905994 29907121 ECH