Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02061 ATGGGTAGAATATTACAACAGTATGTGGCTATGAAAACGGATGCCGTTGTTTCTAATTTAATCGATTCCGATATAAATGAGCTCAAGTTTGCAGCCAAGAAGCTCCTCCACGATGCCACCATGCTAGGAGGCAAAGGCATTGGCCCTTCTTTCTTTAAATGGATTGCTTCCTTTGCTGCCATTTATCTACTGATACTGGATAGCACAAACTGGAGGACAAATATGCTGACAGCGTTATTAGTGCCTTACATATTCTTCAGTTTTCCCGAGTCGCTGTTCCAATTTTTAAGAGGAGAAGTTGGAAAATGGATTGCATTCATCGCAGTCGTGCTGAGGCTTTTCTTCCCTAGACATTTTCCCGATTGGCTGGAAATTCCTGGATCAATGATCCTTATTTTGATAGTGGCCCCTAACATCTTTGCTCGCAGATTAAGGAACAACTGGATTGGATTAGCGATTGATCTTTTCATTGGTTGTTACCTACTACAAGAACATATCAGGGCTTCCGGTGGATTCAGAAATTCTTTCACACAGAAACATGGAATATCAAATACTCTTGGCATCCTCCTCCTCATAGTCTATCCTATTTGTGCATTCGTTATCCGTTAA 609 0.4122 MGRILQQYVAMKTDAVVSNLIDSDINELKFAAKKLLHDATMLGGKGIGPSFFKWIASFAAIYLLILDSTNWRTNMLTALLVPYIFFSFPESLFQFLRGEVGKWIAFIAVVLRLFFPRHFPDWLEIPGSMILILIVAPNIFARRLRNNWIGLAIDLFIGCYLLQEHIRASGGFRNSFTQKHGISNTLGILLLIVYPICAFVIR 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02061 202 Pfam Cold acclimation protein WCOR413 11 191 IPR008892 GO:0016020
Pumo4g02061 202 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 7 200 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02061 Pumo-Chr4 29196278 29198011 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02061 - - gmx:100817084 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02061 4 29196278 29198011 Pumo4g02061 4 29196278 29198011 ECH