Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01784 ATGAAAACAAGGAGAGGAAAACGCTCAGAGGCCTTTTGGCCCTCCCTTGTGATGAAGAAATGGTTAAACATAAAGCCAAAGGTGTATGATTTTAGTGAAGATGAAGTGGACACTGAAACTGAGAGTGAAGATGATGCTTGCTCTCTTAAAGATTCAAGAATGGGTGTGCGTGAAGATACACCACTTAGAACACAATCCATATTCCCAAGTCAAACATCAGATGCAACTTGTAAGGGCTACAAGACAAGACATAGAAGAGGGAAATCAGAAACTCTGCGTGTTCAATACATAAATACAAAGGAAGTGAGGTCTGGTGGTAATCAAGTTATGTATTGTATTATTAATTTAAAGATATTAATGAAATGCATCATAAAATTGTTATTTTGCAGGGTAACAATTGGCACATGGAATGTTGCTGGAAGAGTTCCAAGTAAGGATCTTGATATTGAGGACTGGCTTTGTACCAATGAGCCAGCAGATATTTACATTATTGGTTTCCAAGAGGTTGTCCCCTTGAATGCTGGAAATGTTCTGGGGGCAGAGGATAACACACCCATCCGAAAATGGGAAGCAATCATTCGAAGAACTCTGAACAAATCTTCTGAACCTGAAAACAAGCACAAAAGCTACAGTGCCCCTCCTTCTCCTGTTTTAAAAACTTCTGCTTCTGCTAATGTTCTAGCAGACAGTATAGATGTTAATCCTCTAGACATGATGAATGAGGAGTATTTAGGAACTATTGACAATGATGAGCTAGAACAAGAGGAAGTGAAAAGCATAATTGGTAAAGGAAAGAATTTACAGTTGAGGAAAATACATGACATTGATCATCAGACTATACTTGACTGGCCTGAACGTCCATTAGATGTCACCCCACTTACTGAAACCAGTCCAAAATTGCGAAGAGTACTAAGCAGCTCAGACAGAACTGGCTTTAGCTGGACAGATAATGCTTCAAAATATGGGGGTGTAATGAAACGGTCACACCATAGTTCTGGAAATTTGGGTTTGTTATGGAAAGAGCAGAAAGTGATGCCTGAAGAAGTAATTGATACTCTTGATGACTTATCTGACATGCTATCGGATGAAGAAGATGATGATTTCTTTGAAGTACCAAATGACAAAGAAGATAATGGAACAGGTACGGTGAAATCTCATCCTAAGTATGTCCGGATTGTCAGCAAGCAGATGGTAGGAATATATGTGTCTGTTTGGGTGCAAAGGAGGTTGAGAAGGCACATTAATAACTTGAAAGTTTCTCCAGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGGGGTCTGTTTCAGTTAGTATGTCTCTCTTTCAGTCACGTTTGTGCTTTGTTTGTTCCCATCTGACTTCTGGTCAGAAGGATGGGGCAGAAATAAGACGAAATGCAGATGTTCTTGAAATTCTTCGCCGCACTTGTTTCTCATCCGTCTTTGATACAGATCAACCGCAAACAATTCCATCACATGATCAAATTTTCTGGTTTGGGGATTTGAATTATCGTATCAGTATGATGGATGGGGAGGTTCGAAAGCTGGTAGCTCTAAAGAAATGGGATGAACTGATGAATTACGATCAGCTAACTAATGAATTACGTAGTGGGCATGTGTTTGATGGATGGAAAGAGGGGTTGATAAACTTCCCACCCACTTACAAGTATGAATTTAATTCTGATAAATATATTGGTGAGAACCCAAAAGAAGGGGAAAAGAAGAGATCTCCAGCATGGTGTGATCGTATACTGTGGCTAGGAAAAGGAATAAAGCAACTTCAATACAGGCGTGCAGAAAATAAGCTCTCGGATCATCGACCAGTTAGTTCAATATTCTCGGTTGATGTTGAAGTATTTGACCACCGCAAACTACAACGAGCTCTGAATTTCACAAATGCAGCAGTACACCCTGAGATTTTCCTTAAAGAAGATGGAGACTGGTCATATTAG 1956 0.3978 MKTRRGKRSEAFWPSLVMKKWLNIKPKVYDFSEDEVDTETESEDDACSLKDSRMGVREDTPLRTQSIFPSQTSDATCKGYKTRHRRGKSETLRVQYINTKEVRSGGNQVMYCIINLKILMKCIIKLLFCRVTIGTWNVAGRVPSKDLDIEDWLCTNEPADIYIIGFQEVVPLNAGNVLGAEDNTPIRKWEAIIRRTLNKSSEPENKHKSYSAPPSPVLKTSASANVLADSIDVNPLDMMNEEYLGTIDNDELEQEEVKSIIGKGKNLQLRKIHDIDHQTILDWPERPLDVTPLTETSPKLRRVLSSSDRTGFSWTDNASKYGGVMKRSHHSSGNLGLLWKEQKVMPEEVIDTLDDLSDMLSDEEDDDFFEVPNDKEDNGTGTVKSHPKYVRIVSKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSVSMSLFQSRLCFVCSHLTSGQKDGAEIRRNADVLEILRRTCFSSVFDTDQPQTIPSHDQIFWFGDLNYRISMMDGEVRKLVALKKWDELMNYDQLTNELRSGHVFDGWKEGLINFPPTYKYEFNSDKYIGENPKEGEKKRSPAWCDRILWLGKGIKQLQYRRAENKLSDHRPVSSIFSVDVEVFDHRKLQRALNFTNAAVHPEIFLKEDGDWSY 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01784 651 Gene3D Endonuclease/exonuclease/phosphatase 121 213 IPR036691 -
Pumo4g01784 651 SUPERFAMILY DNase I-like 130 633 IPR036691 -
Pumo4g01784 651 Gene3D Endonuclease/exonuclease/phosphatase 348 640 IPR036691 -
Pumo4g01784 651 FunFam Type I inositol polyphosphate 5-phosphatase 2 326 640 - -
Pumo4g01784 651 SMART i5p_5 312 622 IPR000300 GO:0016791|GO:0046856
Pumo4g01784 651 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 17 636 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01784 Pumo-Chr4 23489453 23497791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01784 382 645 Acyl Lipid Metabolism Gene Families AT1G65580 30.945 2.12e-34 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01784 K24221 - gmx:100807214 1125.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02099 8 57962548 57967726 Pumo4g01784 4 23489453 23497791 PCT