Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01760 ATGTCGGCAAGGCAAGGCAAGTCACTCTCTTTCTCCATGGACGGTCTCATCAAGGGCCTGATCGACGTTGCTCTCGGTGGCCATGGTGCCGATCAGGATGACAACGATCGGGAACAACAACAACAACGCAGTGAACGCTCCTCCTGGGCCGACGTCGTCTCCGGCGAAGATCACGATCAGGAGGAGGATCACCCGCGTCCTCATCAGCACCAGCACCAACAGTGGTCCAACCCACCCCACAAGCAACAGTGGCAAGAGGATACTCACAGTTACAACAGGCCTCATCATCAGTACGAGGAGTCCCAATCTGAAAGATTCAACACTTCCAACGCACCCCACAAGTTGGATGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTTCAAGGCGGACACACAAGGTTCCAAAGGAAAACTGGAACAGCTATAAACGACCTGCTGATGAGCAAGAATACTCTAATGAGGCTGAATTTGGTGCTAGTGTGGAGCCCTCAGGAGATGAACTTGCTGATCTAGCAAGAGCTTGTGACAAACTCTGGGATCTTGATTTAAATCGGTTGATACCTGGTAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGCTTACCAAAAGGAAGATGTGGCACAGGGGAGCTTGTTTACTTGGGTGAGTGATGATGTATTCAGAAGGCCCACATTTGCTCGTTTTCTTTCACTTCTAGATAATTACAATCCACACCAAGGATGTAAGGAAGTAGTCACATCTGAAGAGAAACAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAATTGCATCAGGGAGTTACCAAGATTTCAAAAGAATGATTACCAGTCTGTGGTTTGACCTTTATGGCCGTGGTGGCACTTATGGTTCCTCTTCTGCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAAAGCAGTGAAGTTTCTGGCTTTCATAACTGGCTTCAGTTTTACCTTGAAGAAGAAAAGGGGAGAGTTGATTATCAAGGCTATATTTTCCCCCGTCGACGGGGACAATTTCCTGACTCTGAAACCCAGCTTCTGACTATTCAGTTTGAATGGAATGGTGTTTTGAAATCTGTATCAAGCACTTTGGTTGGAGTGAGCCCTGAATTTGAAATTGCTTTGTATACCCTGTGTTTCTATCTTGGCGGGGAGGATAACCACATTCAAATTGGTCCATATGAAGTTAATATCAAGTGCTATCGTTTTGGCGATCGAATTGGATCTGTTTTCCCCATTGCAGATTCTTGA 1311 0.4516 MSARQGKSLSFSMDGLIKGLIDVALGGHGADQDDNDREQQQQRSERSSWADVVSGEDHDQEEDHPRPHQHQHQQWSNPPHKQQWQEDTHSYNRPHHQYEESQSERFNTSNAPHKLDEDQDGWQTVGKPSRRTHKVPKENWNSYKRPADEQEYSNEAEFGASVEPSGDELADLARACDKLWDLDLNRLIPGKDYEIDCGEGKKAYQKEDVAQGSLFTWVSDDVFRRPTFARFLSLLDNYNPHQGCKEVVTSEEKQEQASFIEEISRTAPIKYLHKYLASKGIASGSYQDFKRMITSLWFDLYGRGGTYGSSSAFEHVFVGEIKQSSEVSGFHNWLQFYLEEEKGRVDYQGYIFPRRRGQFPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYLGGEDNHIQIGPYEVNIKCYRFGDRIGSVFPIADS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01760 436 CDD XendoU 168 432 IPR018998 GO:0004521
Pumo4g01760 436 Pfam Endoribonuclease XendoU 172 432 IPR018998 GO:0004521
Pumo4g01760 436 SUPERFAMILY EndoU-like 170 434 IPR037227 -
Pumo4g01760 436 MobiDBLite consensus disorder prediction 29 70 - -
Pumo4g01760 436 MobiDBLite consensus disorder prediction 71 85 - -
Pumo4g01760 436 PANTHER PLACENTAL PROTEIN 11-RELATED 68 435 IPR039787 GO:0004521
Pumo4g01760 436 MobiDBLite consensus disorder prediction 86 102 - -
Pumo4g01760 436 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 168 436 IPR018998 GO:0004521
Pumo4g01760 436 MobiDBLite consensus disorder prediction 26 141 - -
Pumo4g01760 436 MobiDBLite consensus disorder prediction 110 124 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01760 K14648 - gmx:100813919 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01760 4 23137887 23141245 Pumo4g01760 4 23137887 23141245 ECH