Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01650 ATGTCTCCAAAATCAAATGCTAAAGCTATGTTCTTCATCTTAAAAATATTAATGTTAAATGGTTTACCACCAATATATGCATGTGGTCCCTGCACTCCGCCACGTCACCCCAAACGGCCACCGCATCACGGAGGAGGCCGGCCAAAAGTGTCCCCTCCGCTCCCGCCGATCATAATCAACCCTCCGCCTGTGGTACCTCCTCCGGTGGTGATATACCCTCCGCCAACATCTCCACCGTACCCGCCGCCGCCACACGGTGGTGGTGGTTATCCTCCTCAACTGACATGTCCCATTGATGCCCTAAAATTGGGACTTTGCTTGGATGTGCTTGGAGGATTGGTGCACGTGGGAATAGGGAACCCAGTGGAGAACGTGTGCTGTCCCGTTATACAAGGGTTGCTTGATCTTGAAGCTGCAATTTGTCTTTGCACCGTTATTAGGGCTAAGCTTCTTAACCTAAATATCTTCCTTCCTCTTGCACTTCAAGTTCTGATCACTTGCGGGAAGACTCCTCCTCCTGGTTTTGTGTGTCCACCTCTGTATTAA 546 0.5 MSPKSNAKAMFFILKILMLNGLPPIYACGPCTPPRHPKRPPHHGGGRPKVSPPLPPIIINPPPVVPPPVVIYPPPTSPPYPPPPHGGGGYPPQLTCPIDALKLGLCLDVLGGLVHVGIGNPVENVCCPVIQGLLDLEAAICLCTVIRAKLLNLNIFLPLALQVLITCGKTPPPGFVCPPLY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01650 181 SMART aai_6 96 177 IPR016140 -
Pumo4g01650 181 Pfam Hydrophobic seed protein 95 178 IPR027923 -
Pumo4g01650 181 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 98 179 IPR036312 -
Pumo4g01650 181 CDD HPS_like 95 177 IPR027923 -
Pumo4g01650 181 PANTHER - 8 177 - -
Pumo4g01650 181 Gene3D - 90 179 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01650 Pumo-Chr4 20984188 20984733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01650 95 179 Acyl Lipid Metabolism Gene Families AT4G22490 35.294 6.70e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01650 - - gmx:100807391 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01650 4 20984188 20984733 Pumo4g01650 4 20984188 20984733 ECH