Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01649 ATGGCTTCCAAAACTTGCTCCACCCTTGCCCTTTTCCTCACACTCAACCTCGTCTTCTTCTCACTTGTCTCAGGATGCGGTTATTCATGCCCTGGTCCAACCCCAAAGCCAAAGCCAAGGCCCAACCCCAACCCCAACCCTAACCCCAGCCCTAGTGGCTCGTGCCCCCGTGACGCACTCAAACTAGGTGTATGCGCCAATGTGCTAAACTTGGTGAACGCCACTCTGGGTCAACCACCAGTTACCCCTTGCTGCACCCTTCTCGATGGCCTCGTTGACCTTGAGGCTGCAGTGTGCCTCTGCACTGCCCTCAAAGCAAATATTTTGGGCATCAACCTCAACCTCCCAATCTCACTCAGCTTGCTCCTCAATGTTTGCTCAAGGAAAGTCCCACGTGATTTCCAATGTGCCTAA 414 0.5362 MASKTCSTLALFLTLNLVFFSLVSGCGYSCPGPTPKPKPRPNPNPNPNPSPSGSCPRDALKLGVCANVLNLVNATLGQPPVTPCCTLLDGLVDLEAAVCLCTALKANILGINLNLPISLSLLLNVCSRKVPRDFQCA 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01649 137 Gene3D - 54 137 IPR036312 -
Pumo4g01649 137 PANTHER - 8 136 - -
Pumo4g01649 137 MobiDBLite consensus disorder prediction 34 52 - -
Pumo4g01649 137 CDD HPS_like 54 136 IPR027923 -
Pumo4g01649 137 Pfam Hydrophobic seed protein 55 137 IPR027923 -
Pumo4g01649 137 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pumo4g01649 137 MobiDBLite consensus disorder prediction 34 55 - -
Pumo4g01649 137 SMART aai_6 55 136 IPR016140 -
Pumo4g01649 137 FunFam pEARLI1-like lipid transfer protein 1 53 137 - -
Pumo4g01649 137 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 57 136 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01649 Pumo-Chr4 20977070 20977941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01649 48 136 Acyl Lipid Metabolism Gene Families AT4G22490 39.130 5.78e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01649 - - gmx:100801451 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01649 4 20977070 20977941 Pumo4g01649 4 20977070 20977941 ECH