Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01646 ATGGCTTGCAAAACCCGTTCTTCCCTTGCTCTTTTCCTCACACTCAACATTCTCTTCTTTTCCCTTGTCTCTGCCTGTGGGACATGCCCTGGGTCAAAGCCAAGCCCCAACCCTTCAGGTGGCTCTGGTGGTTCAGGTGGCGCGTGCCCTCGTGATGCACTCAAACTAGGTGTATGCGCCAATGTGCTAAACTTGGTGAACGCCACTGTGGGTCAACCACCAGTTACCCCTTGCTGCACCCTTCTCGATGGTCTCGTTGACCTTGAGGCTGCAGTGTGCCTCTGCACTGCCCTAAGAGCAAACATTTTGGGCATCAACCTCAACCTTCCCATCTCGCTCAGCTTGCTTCTCAACGTTTGCTCAAGGCAAGTCCCACGTGACTTCCAATGTGCCTAA 396 0.5354 MACKTRSSLALFLTLNILFFSLVSACGTCPGSKPSPNPSGGSGGSGGACPRDALKLGVCANVLNLVNATVGQPPVTPCCTLLDGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQVPRDFQCA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01646 131 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 51 130 IPR036312 -
Pumo4g01646 131 Pfam Hydrophobic seed protein 49 131 IPR027923 -
Pumo4g01646 131 Gene3D - 48 131 IPR036312 -
Pumo4g01646 131 PANTHER - 7 130 - -
Pumo4g01646 131 CDD HPS_like 49 130 IPR027923 -
Pumo4g01646 131 FunFam pEARLI1-like lipid transfer protein 1 47 131 - -
Pumo4g01646 131 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pumo4g01646 131 SMART aai_6 49 130 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01646 Pumo-Chr4 20923016 20923411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01646 35 130 Acyl Lipid Metabolism Gene Families AT4G22490 38.542 7.33e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01646 - - gmx:100801451 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01646 4 20923016 20923411 Pumo4g01646 4 20923016 20923411 ECH