Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01645 ATGGGTTCCAAAACTTGCTCTTCCCTTGCTCTTTTCCTCACAATAAACATTCTCTTCTTTGCCCTTGTCTCTGCCTGCGGGACCTGCCCTAGTCCAAAGCCAAGGCATAAGGACAAGCCTGTCAAGCCAAGCCCTTCAGGTGGCTCTGGTGGTTCAGGTGGCTCGGGAGGCTCAGGTGGTTCAGGAGGTTCAGGTGGTTCAGGAGGCTCTGGTGGCTCAGGTGGATCTGGTGGCTCAGGTGGTTCAGGTGGCTCAGGTGGTTCTGGTGGCTCTTGCCCCCGTGATGCACTCAAACTAGGTGTATGTGCCAATGTGCTAAATGGTTTGCTGAATGTGACTTTGGGTCAACCACCAGTTACCCCTTGTTGCTCCCTCCTCAATGGTCTCGTTGATCTTGAAGCTGCAGTGTGCCTTTGCACTGCCCTAAGAGCAAACATTTTGGGCATCAATCTCAACCTTCCAATCTCACTCAGCTTGCTTCTCAACGTTTGCTCAAGACAAGCCCCACGTGGCTTCCAATGTGCCTAA 528 0.5265 MGSKTCSSLALFLTINILFFALVSACGTCPSPKPRHKDKPVKPSPSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSCPRDALKLGVCANVLNGLLNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSRQAPRGFQCA 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01645 175 PANTHER - 7 174 - -
Pumo4g01645 175 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 94 174 IPR036312 -
Pumo4g01645 175 CDD HPS_like 92 174 IPR027923 -
Pumo4g01645 175 SMART aai_6 92 174 IPR016140 -
Pumo4g01645 175 MobiDBLite consensus disorder prediction 48 86 - -
Pumo4g01645 175 Pfam Hydrophobic seed protein 92 175 IPR027923 -
Pumo4g01645 175 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Pumo4g01645 175 Gene3D - 91 175 IPR036312 -
Pumo4g01645 175 MobiDBLite consensus disorder prediction 31 87 - -
Pumo4g01645 175 FunFam pEARLI1-like lipid transfer protein 1 90 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01645 Pumo-Chr4 20913966 20914883 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01645 90 174 Acyl Lipid Metabolism Gene Families AT4G22490 44.706 4.91e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01645 - - gmx:100798361 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01645 4 20913966 20914883 Pumo4g01645 4 20913966 20914883 ECH