Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01574 ATGGGTGTGTGGTGGTGGAGGCTGTTTTTTGCTGCTCTTGCTGGGATCCTCTTCTCTCCTCAACACTGTGCTTCCCAAAAAGTTCCAAACTACACATTTATGCACAATGCGACCACTGCACCAGACGTATCATACTACGACTACATCGTGATTGGCGGAGGCACCGCAGGGTGCCCTTTAGCTGCGACATTGTCCCAAAATTACAGTGTGTTGCTGCTTGAACGCGGTGGGTCACCCTACGGCAACCCCAACATCTCCAACTTAGCTGCTTTCGGTGCTGCTCTCTCCGACCCTTCCCCTACCTCCCCCGCTCAGCGTTTCATCTCCGAAGACGGTGTTATCAACTCAAGAGGCCGCGTCCTCGGTGGTGGAAGTTGCTTGAACGCTGGCTTTTACACTCGCGCTGGCCCTCAATATGTAAGGGAAGCGGGGTGGGATGGAAGGGCAGTGAATGAGTCGTACGAATGGGTGGAGAAAATAGTGGCGTTTGAGCCACAAGTGAAGCAGTGGCAGTCAGCTGTGCGTGATGGACTAATAGAGATTGGTGTGCTGCCTAATAATGGCTTCACTTACGACCATATTGATGGGACTAAGGTAGGGGGCACCATCTTTGACCACAATGGCTTCAGGCACACCGCTGCTGATCTTTTGGAATATGCCAACCCCACTGGAATTACCGTGCTTTTGGATGCCACCGTGCACAGGATCTTGTTTAGAGTCAAAGATGGATCAAAACCAACGGCCCACGGAGTGGTGTTCAGGGATTCATTGGGTCGTAGACACAAGGCGTACCTGAAGCACGATCCAAGGAACGAGATCATCGTTTCGGCTGGTGCACTTGGAAGCCCACAACTTCTAATGTTGAGTGGAATTGGGCCCGCAGAGCACCTTAGGGCCCATAACATCAGAATAACATTGGATCAGCCATTAGTAGGACAGGGAATGTCAGACAACCCGATGAACGCCATCTTTGTCCCATCTCCTGTCCCGGTGGAGGTATCTCTGATTGAGGTGGTGGGCATCACCAGTTTTGGTAGCTACATTGAAGCTGCCAGTGGTGAAAACTTTGCCGGTGGTTCCCCAAAAGACTACGGAATGTTCTCCCCCAAGATTGGACAACTCTCTACAGTGCCTCCAAAGCAAAGAACCCAAGAGGCCCTTGCTAAGGCAACAGAATTGATGGAAACTCTGGACGAAGCAGCCTTCAGAGGCGGATTCATATTGGAGAAAATCATGGGCCCAATCTCAAGCGGGCATTTGGAGCTCCGAACCCGCAACCCAAACGACAACCCGTCAGTGACCTTCAACTACTTCCAGGACCCCCGGGACTTGGAGCGGTGCGTGCAGGGCCTCAGCACCGTGGAGAAGATAATCGAGTCAAAGGCATTCGCTCCCTTCAGATACCCGAACATGCCAGTGCCCGTGCTACTCAACATGACCGCAAGTTCACCCGTTAACTTGTTGCCTAAGCACACCAATTCCTCCCTGTCTCTCGAACAGTTCTGCAGAGACACTGTGATGACCATTTGGCACTACCACGGAGGGTGCCAGGTTGGGAAAGTTGTTGATAGGGACTACAAGGTTCTTGGTGTGGACGCACTGCGTGTTATTGATGGCTCCACCTTTAACTACTCTCCTGGAACTAATCCTCAGGCCACTGTTATGATGCTTGGCAGGTATATGGGAGTCAAAATATTGAGCGAGAGACTGGATGGTGCGGCTGCTGCTGATCAAACAGAACGATAA 1746 0.5178 MGVWWWRLFFAALAGILFSPQHCASQKVPNYTFMHNATTAPDVSYYDYIVIGGGTAGCPLAATLSQNYSVLLLERGGSPYGNPNISNLAAFGAALSDPSPTSPAQRFISEDGVINSRGRVLGGGSCLNAGFYTRAGPQYVREAGWDGRAVNESYEWVEKIVAFEPQVKQWQSAVRDGLIEIGVLPNNGFTYDHIDGTKVGGTIFDHNGFRHTAADLLEYANPTGITVLLDATVHRILFRVKDGSKPTAHGVVFRDSLGRRHKAYLKHDPRNEIIVSAGALGSPQLLMLSGIGPAEHLRAHNIRITLDQPLVGQGMSDNPMNAIFVPSPVPVEVSLIEVVGITSFGSYIEAASGENFAGGSPKDYGMFSPKIGQLSTVPPKQRTQEALAKATELMETLDEAAFRGGFILEKIMGPISSGHLELRTRNPNDNPSVTFNYFQDPRDLERCVQGLSTVEKIIESKAFAPFRYPNMPVPVLLNMTASSPVNLLPKHTNSSLSLEQFCRDTVMTIWHYHGGCQVGKVVDRDYKVLGVDALRVIDGSTFNYSPGTNPQATVMMLGRYMGVKILSERLDGAAAADQTER 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01574 581 PIRSF Alcohol_oxidase 22 577 IPR012132 GO:0050660
Pumo4g01574 581 PANTHER OSJNBA0019K04.7 PROTEIN 11 570 - -
Pumo4g01574 581 SUPERFAMILY FAD/NAD(P)-binding domain 44 568 IPR036188 -
Pumo4g01574 581 Gene3D - 163 508 - -
Pumo4g01574 581 SUPERFAMILY FAD-linked reductases, C-terminal domain 315 515 - -
Pumo4g01574 581 Gene3D - 46 558 IPR036188 -
Pumo4g01574 581 ProSitePatterns GMC oxidoreductases signature 2. 278 292 IPR000172 GO:0016614|GO:0050660
Pumo4g01574 581 Pfam GMC oxidoreductase 414 559 IPR007867 GO:0016614
Pumo4g01574 581 Coils Coil 380 400 - -
Pumo4g01574 581 Pfam GMC oxidoreductase 46 319 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01574 Pumo-Chr4 19873610 19880998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01574 3 569 Miscellaneous Gene Families AT5G51950 58.188 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01574 - - gmx:100780028 1114.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01574 4 19873610 19880998 Pumo4g01574 4 19873610 19880998 ECH