Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01564 ATGTTCCATCCATTGAAGATGTCACTGGAAACTGCTGATGCCCATGGTCCAGATATCCATGGGACTGTCATAATCGATGATGAAGATGATGAACATAATCCACCTGCCCAGATTGCACATCAAGATGAGCAAACACATAAGATCTTGGCTGATACTTCACTCAATAGCAGTGCTAGACCTAGTGCTCCTGAATCTGAGAATTTGCCAGATTATAGCAATGACATAGAAGAAGAAATGATTCGTGCAGCCATTGAGGCTTCTAAACGGGAGGCTGAGGAAAATTATAGAAATCACAAACTTGGCAGTCAAATTGACTTAAGTGAATCAGGATCACAGCCAAGGCAATCTTATTTGGAGGATCCTGAGCTTGCCCATGCAGTTTCATTGTCCCTGAAGACAGCTGAGCAAGAAAAAGCATGGCAAGTACAGGGGGGAGATTCTGGATCACCAACAGCAGGGCCGTCTAAGTCATTAGAGGCTGGACTAGGGGAAGTGGCATCAAATGGAAGATTGCAGGCAGGAAGCTTGTCATTTCATGATGAAGCTGAAGATGTAGAGGAGCAGCCACTGGTTAGGAATAGATCTAGACATATGTCTTCGGGATCCACAGGATTGGGCAAAGATGTTGAATTAGCCGAGGCTAGCACACTACCAAGCACAGCTAGCACACTACCAAGCACAGCAACACAGGATAGCAGTAATCCTCGTCATAATGGAAATTCCTTCCCCTCTGATGAGTGGGGTGGCATTTCTTCTGAGGAGCATGATGAAGCAGTAATGCTAGAAGCTGCAATGTTTGGTGGAATCCCAGAAGGGAGTGGGTATCACTATGGCTATGCACCACATGAGTTTATGCAAAATAGGGGTTTCAATCCTCGGCCCCAATATCGCCCTCCTTCACCATCACTGGCAGCTCAACGCTTGATAAGGGAACAACAGGATGATGAATATCTTGCATCATTACAAGCAGACAGAGAAAAAGAATTGAAGGCCATGGAGGAAGCTGAGGCTGCTCGTGAAGAGGAAAGACGGAGAGCAGAAGAATCTCGCAGGAAATTACAGGAAGAGCAGGAATTGGAAACAAAATTAGCAGCCAAAGAAGTCTCACTACCACCAGAACCATCCTCATATGATGATAATGCTGTGAACTTGCTGGTAAAAATGCCAGATGGCAATCGTCGTGGACGTCGATTCCTAAGATCTGATAGGCTACAGTCTTTGTTCGACTTCATAGATATTGGTAGGGTGGTGAAACCAGGCAGTTACAGACTGGTGAGACCATATCCTAGGCGTGCTTTTAGTGATGGAGAAAGTGCTGCGACACTGGATGAACTTGGCCTAACCAACAAGCAAGAAGCTTTGTTTTTGGAGTTAATCTGA 1380 0.4543 MFHPLKMSLETADAHGPDIHGTVIIDDEDDEHNPPAQIAHQDEQTHKILADTSLNSSARPSAPESENLPDYSNDIEEEMIRAAIEASKREAEENYRNHKLGSQIDLSESGSQPRQSYLEDPELAHAVSLSLKTAEQEKAWQVQGGDSGSPTAGPSKSLEAGLGEVASNGRLQAGSLSFHDEAEDVEEQPLVRNRSRHMSSGSTGLGKDVELAEASTLPSTASTLPSTATQDSSNPRHNGNSFPSDEWGGISSEEHDEAVMLEAAMFGGIPEGSGYHYGYAPHEFMQNRGFNPRPQYRPPSPSLAAQRLIREQQDDEYLASLQADREKELKAMEEAEAAREEERRRAEESRRKLQEEQELETKLAAKEVSLPPEPSSYDDNAVNLLVKMPDGNRRGRRFLRSDRLQSLFDFIDIGRVVKPGSYRLVRPYPRRAFSDGESAATLDELGLTNKQEALFLELI 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01564 459 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 76 94 IPR003903 -
Pumo4g01564 459 PANTHER FAS-ASSOCIATED PROTEIN 39 458 - -
Pumo4g01564 459 Gene3D - 72 143 - -
Pumo4g01564 459 ProSiteProfiles UBX domain profile. 377 455 IPR001012 GO:0005515
Pumo4g01564 459 SMART uim 118 137 IPR003903 -
Pumo4g01564 459 SMART uim 75 94 IPR003903 -
Pumo4g01564 459 CDD UBX 383 457 - -
Pumo4g01564 459 SMART ubx_3 374 458 IPR001012 GO:0005515
Pumo4g01564 459 MobiDBLite consensus disorder prediction 215 247 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 177 193 - -
Pumo4g01564 459 SUPERFAMILY Ubiquitin-like 340 455 IPR029071 -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 48 68 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 327 357 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 20 37 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 89 121 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 134 250 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 134 154 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 12 73 - -
Pumo4g01564 459 MobiDBLite consensus disorder prediction 100 116 - -
Pumo4g01564 459 Gene3D - 378 458 - -
Pumo4g01564 459 Pfam UBX domain 378 457 IPR001012 GO:0005515
Pumo4g01564 459 Coils Coil 318 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01564 Pumo-Chr4 19712688 19717424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01564 - - gmx:100777000 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01564 4 19712688 19717424 Pumo4g01564 4 19712688 19717424 ECH