Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01554 ATGAACTCTCGGGAGGCCACTTTAGTGGCCACGGCAACTGTTATTGGCGCCTTGGCCTCCGCAATTGGTTTCCGCTTCTTCTTCCGCTCCCAAACGCACGCTAAATCCTCGCAAAACGGCACCGTTTCCTCTCCTCGCGACCCTTTCGACCCCTCCAAGCGCAAAGGATTCTTATCGTGGGATGACTATTTTATGGCAATTGCATTTTTGTCGGCTGAGAGGTCCAAAGACCCTAACAGGCAGGTTGGGGCTTGTTTGGTGAGTCAAGATGGTATAATTCTTGGAATTGGTTATAATGGGTTTCCAAGAGGTTGTTCTGATGACAAGCTACCCTGGGCGAAGAAATCTAGGACGGGGAATCCTTTGGAGACAAAGTACCCTTATGTTTGTCACGCAGAAGTAAATGCTATTCTTAACACTAATCATGCCTCTGCTGCTGGACAACGGCTATATGTGACCATGTTTCCGTGCAATGAATGTGCTAAGATCATAATCCAGTCAGGAGTTTCTGAAGTAATTTATTTTGTGGAGAAGAGACTAGAAAATTCAGATATTGCATATATTGCCTCTCACAAGCTACTTTCATTGGCTGGTGTAAAGGTCAGGAAACATCAACCACTGATGAATGAAATTCATCTGAAGTTTGAGGAGCACTAG 657 0.4536 MNSREATLVATATVIGALASAIGFRFFFRSQTHAKSSQNGTVSSPRDPFDPSKRKGFLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQDGIILGIGYNGFPRGCSDDKLPWAKKSRTGNPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLENSDIAYIASHKLLSLAGVKVRKHQPLMNEIHLKFEEH 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01554 218 Gene3D Cytidine Deaminase, domain 2 51 218 - -
Pumo4g01554 218 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 59 175 IPR002125 -
Pumo4g01554 218 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 131 164 IPR016192 GO:0008270|GO:0016787
Pumo4g01554 218 FunFam Deoxycytidylate deaminase 50 218 - -
Pumo4g01554 218 SUPERFAMILY Cytidine deaminase-like 61 207 IPR016193 GO:0003824
Pumo4g01554 218 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 36 218 IPR015517 -
Pumo4g01554 218 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 59 201 IPR002125 -
Pumo4g01554 218 CDD deoxycytidylate_deaminase 61 174 IPR035105 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01554 K01493 - gmx:100792003 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01554 4 19618755 19621590 Pumo4g01554 4 19618755 19621590 ECH