LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo4g01538	ATGGCGGATCCGATCCCGGCGCCACCAAGATCCGCCACGGACCTCTTCTCGGATCCGCTGGACGCCCACCCTCTGTGGTTCAAACCGGCGTCGTTTCTCTCCCCTGACTTCGATTCCGAATCCTACATTTCCGAGCTCCGAACCTTCGTCCCCTTCGACACGCTCCGCTCCGAGCTCAACAACTACCTCTCCTCCCTCAACCACGAGCTCATCGACCTCATCAACCGCGACTACGCCGATTTCGTCAACCTCAGCACCAAGCTCGTCGACGTCGACGCCGTCGTCGTGCGAATGCGGGCCCCGCTCGTCGAGCTCCGCGAGAAGATCGAGCAGTTCAGAGGATCCGTCGAGGTTTCGCTTGTCGCCATCAAGAACCGCTTGAGGCAAAGATCTGAGGCGGCATCCGCTAGAGAGACTTTGGAGCTTCTCCTCGACACGTTTCACGTTGTTTCTAAGGTTGAGAAACTAATAAAAGAGCTGCCTAGTGTACCCACGGATTGGTCAAATGGAGATGTAAATTTGTCAGAGAGGAATTACTTGAGCAATGGAGTTTCTGTGCAGCATGTTGAGAATGAGACAAGTATCAGAGAGACTCAAAGCATGCTGCTGGAAAGAATTGCCAGTGAGATGAACAGACTAAAGTTCTATGTTACACATGCAAAGAACCTTCCTTTTATTGAGAATATGGAGAAGAGGATTCAAAATGCAAGCCTAACAGTAGATGCAAGCTTGGGACATTGCTTTGTAAATGGTTTGGAGCACCGGGATGCAACTGCAATTTACAATTGCTTACGTGCATATGCTGCTATAGATAACACCAAGAATGCAGAAGAAATGTTTCGAATTACTGTTGTGGCTCCATTGATACAGAAGATTATCCCACATGGATCGTCAGCTGTGGCTGCTGGATCATCTGGGGATGGTCTTGAAAATGATTATCAACTAATTAAGGAGTGCATTGATAAAGAATGTAATTTTTTATTGGAAATTTCTTCAGCTGAAAATTCAGGTTTGCATGTCTTTGACTTCTTAGCCAATTCAATCCTTAAAGAGGTTCTCTCTGCAATTCAGAAGGGAAAACCAGGTGCATTTTCTCCTGGAAGACCAACAGAGTTCTTGAAAAATTACAAATCAAGCTTAGATTTCTTGGCTTATCTAGAAGGCTACTGTCCATCCAGATCTGCTGTTGCTAAATTTCGATCTGAAGCAATTTATACTGAATTCATGAAGCAATGGAATATTGGAGTATATTTCTCTTTGAGGTTTCAGGAAATTGCAGGGTCTCTAGATTCTGTGCTTACAACATCCAGTCTTGTCCCTGTTCAAAATTCAGATGTTGGCGAAGCAAATTATCAAGGTTTAACATTAAAGCAAAGTGTTACTCTGTTGGAGAGTTTGAGATCATGCTGGAGAGAAGATGTTCTTGTCCTTTCTTGTTCTGACAGATTCCTTCGGCTATCCTTGCAGCTTCTTTCTAGATACACAAGTTGGCTGTCATCTGGACTGACTGCTCGCAAAAACCATAACACAAGCACTAGCTCTGGGTGTGAATGGGCTGTTTCAGCTGTTATAGATGACTTCATTTTTGTTATTCATGATATAAGATATTTGGAGGAGCAGGTTCGTGGTGATTACCTACAACATGTGCTTCAGCTTTTGTCTTCATGCTCCCCTGATGTTCTGGAATCAATAAGGCAGAGCATTTTACTGGGTGGTCAATCATTAAAATCCTTAGAACCTTTAGTCATTAAAGCTGTGGTGGAGTCACTAGTGGAAAAGTCAGTTGAGGACTTGAGACAAATGAAGGGGATAACAGCAACCTATAGGATGACTAATAAACCTCTACCTGTGAGGCATTCACCATATGTTTCAGGGGTATTACGTCCCCTTAAGGCTTTTTTGGATGGGGAGAGAGCTACAAGATATTTGGCCAGTGAAACTAGGAATGAAATACTCCTTTGTGCTGCAACTGAGATTACTGACCGTTATTACGAATTAGCTGCTGACCTTGTTAGCGTGGCAAGAAAGACAGAGTCTTCGCTCCAGAAAATTAGGCAGAGTGCACAAAGACGAGCGGGAGCAAGTTCAGATATCTCAGATAATAATGTGTCTGACACTGATAAAATCTGTATGCAGTTGTTCCTTGATATTCAGGAGTATGCTCGTAACCTCTCTGCACTGGGGGTTGAAGCAGTCAATATTGCATCCTACCGTTCATTATGGCAATGTGTGGCTCCTGCAGATAGGCAAAACACAATTAATCTCTAA	2268	0.4418	MADPIPAPPRSATDLFSDPLDAHPLWFKPASFLSPDFDSESYISELRTFVPFDTLRSELNNYLSSLNHELIDLINRDYADFVNLSTKLVDVDAVVVRMRAPLVELREKIEQFRGSVEVSLVAIKNRLRQRSEAASARETLELLLDTFHVVSKVEKLIKELPSVPTDWSNGDVNLSERNYLSNGVSVQHVENETSIRETQSMLLERIASEMNRLKFYVTHAKNLPFIENMEKRIQNASLTVDASLGHCFVNGLEHRDATAIYNCLRAYAAIDNTKNAEEMFRITVVAPLIQKIIPHGSSAVAAGSSGDGLENDYQLIKECIDKECNFLLEISSAENSGLHVFDFLANSILKEVLSAIQKGKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRSEAIYTEFMKQWNIGVYFSLRFQEIAGSLDSVLTTSSLVPVQNSDVGEANYQGLTLKQSVTLLESLRSCWREDVLVLSCSDRFLRLSLQLLSRYTSWLSSGLTARKNHNTSTSSGCEWAVSAVIDDFIFVIHDIRYLEEQVRGDYLQHVLQLLSSCSPDVLESIRQSILLGGQSLKSLEPLVIKAVVESLVEKSVEDLRQMKGITATYRMTNKPLPVRHSPYVSGVLRPLKAFLDGERATRYLASETRNEILLCAATEITDRYYELAADLVSVARKTESSLQKIRQSAQRRAGASSDISDNNVSDTDKICMQLFLDIQEYARNLSALGVEAVNIASYRSLWQCVAPADRQNTINL	755

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo4g01538	755	Pfam	COG complex component, COG2, C-terminal	589	717	IPR024603	-
	Pumo4g01538	755	Pfam	COG (conserved oligomeric Golgi) complex component, COG2	25	156	IPR024602	-
	Pumo4g01538	755	PANTHER	CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2	10	752	IPR009316	GO:0007030\|GO:0015031\|GO:0016020

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo4g01538	K20289		-	gmx:100817096	1379.39

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pumo4g01538	4	19278150	19284302	Pumo4g01538	4	19278150	19284302	ECH