Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01520 ATGGACCTCGGAACCTATGATGTGCCAGAAGGAGTGGACATTCTGGGAAGATATGATGCAGAGTTTGCAAAAATACTCACAAAAGATGCTTTGAAATTTGTTGCTGAGCTGCAACGTAAGTTCAGGAGCGATATAAAGTATGCATTAGAGCGCAGAAGAGAGGCAAAGAAGAAGTACCATGAAGGTGCTCTTCCGGGGTTTGATCCTGCCACCAGTGACATTAGAGAGCAGGAGTGGGTGTGTGCACCTGTTCCACCAGCTGCTGCAGATAGGAAAGTGGAGATTCACTGGCCCTGTGGATAG 303 0.4752 MDLGTYDVPEGVDILGRYDAEFAKILTKDALKFVAELQRKFRSDIKYALERRREAKKKYHEGALPGFDPATSDIREQEWVCAPVPPAAADRKVEIHWPCG 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01520 100 Pfam Malate synthase 13 95 IPR001465 GO:0004474|GO:0006097
Pumo4g01520 100 Gene3D Malate synthase, domain 3 8 100 IPR046363 -
Pumo4g01520 100 SUPERFAMILY Malate synthase G 6 98 IPR011076 GO:0003824
Pumo4g01520 100 PANTHER MALATE SYNTHASE 6 99 IPR006252 GO:0004474|GO:0006097
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01520 Pumo-Chr4 19137102 19137404 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01520 K01638 - gmx:100813906 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01520 4 19137102 19137404 Pumo4g01520 4 19137102 19137404 ECH