Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01508 ATGTTGCCTCCTATTCCTATTCCTATCGATATCAACGGTATAAAAGATAAACTCTCCTATCAGTTCCGCCCTTGGCAACGCTCCTTCCAATTCTGGGTTCGAGCCATTGACATTTACACCGGATACAAGGTGTTTCAAGTGAGAGTGAATTTTGTCAAAGATGCGCAGAAGCAGGAAGCAATGTGGGAGAGGCAGCACGAACTTGCTGCCGATAAGATTTTCGCCATGTGTTCCGACCTCGGAGGTTTCTTCCTCAAGATTGCCCAAATTATAGGGAAGCCCGATTTGGCCCCGGCTGCATGGGTGAAAAGGCTGGTTACGCTATGTGATAGGGCTCCTCCAACCTCTTTTGATGTGGTGAAACTAGTGCTGGAGAATGAGCTGAGACAGGGTATTGATGATGTGTTCGAGAGGTTTGATGTTGAACCCCTTGGTTCTGCTTCAATTGCTCAGGTTCATAGAGCACGACTGAAAGGTGATGCAGGTGATGTTGTTGTCAAGGTTCAACATCCTGGAATTCAGGATCTGATGATGACGGATATCCATAACTTGCAAGCGTTTGCATTGTACATGCAAAAGACAGATATCAAATTTGATCTATATTCAGTGACTAAGGAAATGGAAAAACAGATTGGATATGAATTTGACTTCATGAGGGAGGCTGATGCAATGGAAAGGATTAGAAAGTTCTTGTATGAAAATAACAAAAAGTCTCCTGTTTTGGTGCCACGAGTAATACGAGATATGGTTACTAGAAGGGTCCTAGTTATGGAATATATTGATGGGATTCCAATAATGAACCTTGGTGATGAAATAGCAAAGAGGGGCATAAATCCTCGTGGCAAGGTTGCAGCAGCAGCAAAGCAGAAAATTCTTGAAAGCTTGACTCTAGCATATGGTCAAATGATTTTGAAAAGTGGATTCTTCCATGCAGATCCTCATCCAGGAAATATCCTGATTTGTAAAGGATCAGAGGCAAATGACAATCAGTTAGTGGGTATGGAGCTTGGCATAGAAACCTTGAGCAATTGTGAAAATGAGCTACAAGAATTGTTTAGACTAGCAGAGACAATGTTCGATACAAAATTGCCTCCAGGGGTGGTAATGCTGCAACCTTTCTCAGAGGAGTCTTCAATTAAAAAAGTTGCTGTTCAGTCTTTTCCAGAAGAACTGTTTTCTGTACTTCGGACAGTGCATCTACTGAGGGGACTTAGCGTTGGACTTGGACTCAATTATTCTTGTGCAGAACAGTGGAGACCCTTTGCAGAAGAAGCTTTGTCCCAAGCTGGCAGATTAAAAGGTAAGGATGTTAAGCCCAGAGGCAGCAAAAAGTTAAGTAAAATATTTTTTGGAGAGACTAAATAG 1365 0.4234 MLPPIPIPIDINGIKDKLSYQFRPWQRSFQFWVRAIDIYTGYKVFQVRVNFVKDAQKQEAMWERQHELAADKIFAMCSDLGGFFLKIAQIIGKPDLAPAAWVKRLVTLCDRAPPTSFDVVKLVLENELRQGIDDVFERFDVEPLGSASIAQVHRARLKGDAGDVVVKVQHPGIQDLMMTDIHNLQAFALYMQKTDIKFDLYSVTKEMEKQIGYEFDFMREADAMERIRKFLYENNKKSPVLVPRVIRDMVTRRVLVMEYIDGIPIMNLGDEIAKRGINPRGKVAAAAKQKILESLTLAYGQMILKSGFFHADPHPGNILICKGSEANDNQLVGMELGIETLSNCENELQELFRLAETMFDTKLPPGVVMLQPFSEESSIKKVAVQSFPEELFSVLRTVHLLRGLSVGLGLNYSCAEQWRPFAEEALSQAGRLKGKDVKPRGSKKLSKIFFGETK 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01508 454 CDD ABC1_ADCK3-like 108 323 - -
Pumo4g01508 454 ProSiteProfiles Protein kinase domain profile. 138 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01508 454 Pfam ABC1 atypical kinase-like domain 108 338 IPR004147 -
Pumo4g01508 454 SUPERFAMILY Protein kinase-like (PK-like) 110 323 IPR011009 -
Pumo4g01508 454 PANTHER ABC1 FAMILY PROTEIN 24 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01508 Pumo-Chr4 19007183 19014164 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01508 K08869 - gmx:100813009 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01508 4 19007183 19014164 Pumo4g01508 4 19007183 19014164 ECH