Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01504 ATGCTGCGTTACCAAATGCTTGATTCAGCACCCTCTTTCCTAGACTCCCTCAAGGCACTTGAGGCTGACATCCAACATGCCAATGTGCTGGCAGCTTCTATTATTCCAAGGGGCAAGGGCAGGGCTTGCCTTCAAATGAAGTTAGTTTACAATAAACTGGCACCAGTTTTTCTGTTTTTATTTCAATGGATGGATTACTCATGCTCGTGTCTACCTTCTAGTCATTTGAATCTTTTCCGTGTAGTTGTGTACAAGGTGCACACCAATGGAAAGTCAAATATCTATTCTAGTGGAAGGAAAGCAACCATAAGGGAGTTCTACAGTGTTATATTACCTTCACTCCAGCGCCTTCATGGTGATTTAGTAGAAGCTGACACTACTCGAGAAAATGATCATAGCATTGAGATGATTCCCAGTAGGAGTGAGGAGGATAAGAGGAAGCCTTCTGATTTGGACCTGGAGAGAGAACATGAGTGTGGCATTTGCTTAGAGTCTTGCACCAAAATGGTTTTGCCAAATTGCTGCCACGCTATGTGTATAAATTGTTACAATGACTGGAACACAAGGTCAGAGTCTTGTCCATTTTGCAGGGGAAATTTAAAGAGAGTTAAGTCGGGGGATTTGTGGGTTCTAACATGCAGTAGAGATGTGATTGATATGCAAACCATATACAGAGAAGATATGTTGCGTCTCTATCTCTTTGTAAACAACCTTCCCGAATATATCCCAGATGCTCTTTTCCTGATGTATTACGAGTACTTATTGTAA 768 0.4167 MLRYQMLDSAPSFLDSLKALEADIQHANVLAASIIPRGKGRACLQMKLVYNKLAPVFLFLFQWMDYSCSCLPSSHLNLFRVVVYKVHTNGKSNIYSSGRKATIREFYSVILPSLQRLHGDLVEADTTRENDHSIEMIPSRSEEDKRKPSDLDLEREHECGICLESCTKMVLPNCCHAMCINCYNDWNTRSESCPFCRGNLKRVKSGDLWVLTCSRDVIDMQTIYREDMLRLYLFVNNLPEYIPDALFLMYYEYLL 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01504 255 Pfam Zinc finger, C3HC4 type (RING finger) 156 202 - -
Pumo4g01504 255 PANTHER RING FINGER PROTEIN 41, 151 12 253 - -
Pumo4g01504 255 SUPERFAMILY RING/U-box 146 202 - -
Pumo4g01504 255 FunFam RING/U-box superfamily protein 140 206 - -
Pumo4g01504 255 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Pumo4g01504 255 SMART ring_2 159 196 IPR001841 -
Pumo4g01504 255 ProSitePatterns Zinc finger RING-type signature. 174 183 IPR017907 -
Pumo4g01504 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 126 207 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01504 Pumo-Chr4 18984449 18986523 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01504 - - cave:132171115 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01504 4 18984449 18986523 Pumo4g01504 4 18984449 18986523 ECH